RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 SVOPLQ8N434 492 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 KIR3DL3Q8N743 410 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 OR56B4Q8NH76 319 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 FAM151AQ8WW52 585 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 GPA33Q99795 319 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 CHRDL1Q9BU40 450 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 ZNF416Q9BWM5 594 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 SPATA16Q9BXB7 569 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 SMYD3Q9H7B4 428 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 SLC25A22Q9H936 323 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 NUDT15Q9NV35 164 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 GNG12Q9UBI6 72 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 PRPF19Q9UMS4 504 aaKnown RBP1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 ASF1AQ9Y294 204 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 MFHAS1Q9Y4C4 1052 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 NEUROG3Q9Y4Z2 214 aa1.94□□□□□ -2.1
RNU6-550P-201ENST00000391057 ATP8B3O60423 1300 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 IGHV3OR16-13A0A075B7E8 117 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 A0A0G2JRQ6 117 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 A0A1W2PNV4 684 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 VSTM2BA6NLU5 285 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 MAPK13O15264 365 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 HCRTR1O43613 425 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 LRATO95237 230 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 RBMY1CP0DJD4 496 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 FGF9P31371 208 aaPredicted RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 HPCAL1P37235 193 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 RPS10P46783 165 aaKnown RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 CSNK1DP48730 415 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 PPOXP50336 477 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 PLA2G16P53816 162 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 SH3BGRP55822 239 aaPredicted RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 SELENOTP62341 195 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 PJVKQ0ZLH3 352 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 TRIM16LQ309B1 348 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 AFTPHQ6ULP2 937 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 ACOT1Q86TX2 421 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 CLDN19Q8N6F1 224 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 ATP6V0D2Q8N8Y2 350 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 FADS6Q8N9I5 356 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 STXBP6Q8NFX7 210 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 OR10A7Q8NGE5 316 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 RAET1EQ8TD07 263 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 CHCHD10Q8WYQ3 142 aaPredicted RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 PIGCQ92535 297 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 MRPS31Q92665 395 aaKnown RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 RAB7BQ96AH8 199 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 SLC35A5Q9BS91 424 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 DPH5Q9H2P9 285 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 RHBGQ9H310 441 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 MTRF1LQ9UGC7 380 aaKnown RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 PHF11Q9UIL8 331 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 AURKCQ9UQB9 309 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 PRG3Q9Y2Y8 225 aaPredicted RBP1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 KIF3AQ9Y496 699 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 WSB1Q9Y6I7 421 aa1.93□□□□□ -2.1
RNU6-550P-201ENST00000391057 SF3B1O75533 1304 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 A6NDX4 124 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 GFYI3L273 518 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 ZSCAN12O43309 604 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 DFNA5O60443 496 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 NEBLO76041 1014 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 DIRAS3O95661 229 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 MMP1P03956 469 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 P04436 131 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 NCF1P14598 390 aaPredicted RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 RPS2P15880 293 aaKnown RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 RCC1P18754 421 aaPredicted RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 ATP6V1B2P21281 511 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 HTR1FP30939 366 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 HNRNPA3P51991 378 aaKnown RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 BIDP55957 195 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 MAP2K1Q02750 393 aaPredicted RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 GTF3C1Q12789 2109 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 RIPK1Q13546 671 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 MXD4Q14582 209 aaPredicted RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 KLF17Q5JT82 389 aaPredicted RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 CASC10Q5T4H9 136 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 FAM71F2Q6NXP2 309 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 BLOC1S2Q6QNY1 142 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 ZNF429Q86V71 674 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 ZNF573Q86YE8 665 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 LRRC43Q8N309 656 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 ZNF786Q8N393 782 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 Q8N9W7 124 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 OR51S1Q8NGJ8 323 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 SPRYD4Q8WW59 207 aaPredicted RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 ST8SIA1Q92185 356 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 RPUSD4Q96CM3 377 aaKnown RBP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 STARD4Q96DR4 205 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 C4orf36Q96KX1 117 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 KCNA7Q96RP8 456 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 HIST1H4GQ99525 98 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 RIT2Q99578 217 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 RASL11BQ9BPW5 248 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 SELENOIQ9C0D9 397 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 POLE3Q9NRF9 147 aa1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 AATFQ9NY61 560 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-550P-201ENST00000391057 TAS2R3Q9NYW6 316 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms