RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SNIP1Q8TAD8 396 aaKnown RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 HPS1Q92902 700 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 MVB12AQ96EY5 273 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF160Q9HCG1 818 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 SLAMF7Q9NQ25 335 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 AGAP14A8MT82 685 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 GPR85P60893 370 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 ABI3BPQ7Z7G0 1075 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 THRSPQ92748 146 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 KLHL15Q96M94 604 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 SLC30A2Q9BRI3 323 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 GPN1Q9HCN4 374 aaPredicted RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 IGHV1OR21-1A0A087WYE8 117 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 H7C1C5 153 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 M0R296 226 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 DSCR3O14972 297 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 SPINT1O43278 529 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 MAS1P04201 325 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 PGAM2P15259 253 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CSNK1A1P48729 337 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 LCN6P62502 163 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 SQSTM1Q13501 440 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 C9orf135Q5VTT2 229 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 YOD1Q5VVQ6 348 aaPredicted RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 AMER3Q8N944 861 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CNEP1R1Q8N9A8 125 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 PAPD5Q8NDF8 572 aaKnown RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CHDHQ8NE62 594 aaPredicted RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 S100A16Q96FQ6 103 aaKnown RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 DICER1Q9UPY3 1922 aaKnown RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CACNA1IQ9P0X4 2223 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CLDN24A6NM45 220 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 C4orf47A7E2U8 309 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CCNKO75909 580 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 TNFSF15O95150 251 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 NOVA1P51513 510 aaKnown RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 WNT4P56705 351 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 CXCR4P61073 352 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 GDF7Q7Z4P5 450 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 TOMM5Q8N4H5 51 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 GAB3Q8WWW8 586 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 TUBA1CQ9BQE3 449 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 MED20Q9H944 212 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 PRDM7Q9NQW5 492 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 VNN3Q9NY84 501 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 TEX13CA0A0J9YWL9 993 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 A6NIZ1 184 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 KDM4EB2RXH2 506 aaPredicted RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 NID1P14543 1247 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 FCARP24071 287 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ELAVL4P26378 380 aaKnown RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 CBX5P45973 191 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 RAP1BP61224 184 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 RAP1AP62834 184 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF836Q6ZNA1 936 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 PRSS41Q7RTY9 318 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 MS4A15Q8N5U1 240 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 OR4F15Q8NGB8 312 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 THOC3Q96J01 351 aaKnown RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 WACQ9BTA9 647 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 LOC100509620A0A075B734 347 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 TMED7-TICAM2A0A0A6YYA0 188 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 DLSTP36957 453 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 PSMB10P40306 273 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 CYB561P49447 251 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 EPHA4P54764 986 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 CWF19L1Q69YN2 538 aaKnown RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF793Q6ZN11 406 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 SLC35F2Q8IXU6 374 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 CAPSLQ8WWF8 208 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 STACQ99469 402 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 TMED7Q9Y3B3 224 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 PCDHGB2Q9Y5G2 931 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 A6NLC8 198 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 P2RX6O15547 441 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 FBXO45P0C2W1 286 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ZGLP1P0C6A0 271 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 GSTT2BP0CG30 244 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 CD79AP11912 226 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 EPHA8P29322 1005 aaPredicted RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 POU3F4P49335 361 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 GMFBP60983 142 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 EIF2B1Q14232 305 aaKnown RBP12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 TMEM201Q5SNT2 666 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 OLFML2AQ68BL7 652 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 KMT5CQ86Y97 462 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 SLC7A13Q8TCU3 470 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 EML2O95834 649 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 DDAH2O95865 285 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 WDPCPO95876 746 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 LCATP04180 440 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 SOX3P41225 446 aa12.13□□□□□ -0.47
PTPRN2-202ENST00000389416 ENTPD1P49961 510 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms