RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PIN4Q9Y237 131 aaKnown RBP1.29□□□□□ -2.2
RNU6-541P-201ENST00000384709 FRMPD4Q14CM0 1322 aa1.29□□□□□ -2.2
RNU6-541P-201ENST00000384709 HIVEP2P31629 2446 aa1.29□□□□□ -2.2
RNU6-541P-201ENST00000384709 IGKV2-28A0A075B6P5 120 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 IGHV3OR16-13A0A075B7E8 117 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 A0A096LNJ9 63 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TRIM64A6NGJ6 449 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TRIM64BA6NI03 449 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 F8WDY8 70 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 PES1O00541 588 aaKnown RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 RIPK2O43353 540 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 LANCL1O43813 399 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 OR4F21O95013 312 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 GNA14O95837 355 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 LGI1O95970 557 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 IGKV2D-28P01615 120 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 MMP1P03956 469 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 ZNF44P15621 663 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 STMN1P16949 149 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 MAGP20916 626 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 PAICSP22234 425 aaKnown RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 COX7A1P24310 79 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 ADSSP30520 456 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 KIF5BP33176 963 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 EPHX2P34913 555 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 RABIFP47224 123 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 NAPAP54920 295 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 MTTPP55157 894 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 HSD17B7P56937 341 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TRIP10Q15642 601 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 PARP10Q53GL7 1025 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TOR1AIP1Q5JTV8 583 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 RABGAP1LQ5R372 815 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 ACSM5Q6NUN0 579 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 ACOT7LQ6ZUV0 252 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 ARCQ7LC44 396 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 CATSPER4Q7RTX7 472 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 MISPQ8IVT2 679 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 NRMQ8IXM6 262 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 ZNF740Q8NDX6 193 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 NPBQ8NG41 125 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 OR10A7Q8NGE5 316 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 OR56B4Q8NH76 319 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 SELENOMQ8WWX9 145 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 MYLPFQ96A32 169 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 AKR1E2Q96JD6 320 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 FAM111AQ96PZ2 611 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TMEM237Q96Q45 408 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 SLC35A5Q9BS91 424 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 NIPSNAP3BQ9BS92 247 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 OR11A1Q9GZK7 315 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 C20orf85Q9H1P6 137 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 DHX33Q9H6R0 707 aaKnown RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 SLC25A22Q9H936 323 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 EML4Q9HC35 981 aaKnown RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 AIG1Q9NVV5 245 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 SMPD3Q9NY59 655 aaPredicted RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 AIPL1Q9NZN9 384 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TBK1Q9UHD2 729 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 XPO7Q9UIA9 1087 aaKnown RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 PSG11Q9UQ72 335 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 RASD1Q9Y272 281 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 GSTK1Q9Y2Q3 226 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 COL5A1P20908 1838 aaPredicted RBP1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 TSPOAP1O95153 1857 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 SHROOM3Q8TF72 1996 aa1.28□□□□□ -2.2
RNU6-541P-201ENST00000384709 KDRP35968 1356 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 GPRASP1Q5JY77 1395 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 SH3TC1Q8TE82 1336 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGLV4-60A0A075B6I1 120 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGKV6-21A0A0C4DH24 114 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 HELTA6NFD8 242 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 MSH4O15457 936 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 PRKYO43930 277 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 N4BP1O75113 896 aaKnown RBP1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 H2BFMP0C1H6 154 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 CHTF8P0CG12 524 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 TDGF1P13385 188 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 IGFBP3P17936 291 aaPredicted RBP1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 NT5EP21589 574 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 PSMA2P25787 234 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 OTX2P32243 289 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 PRKXP51817 358 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 TDGF1P3P51864 188 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 CRISP3P54108 245 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 RPS14P62263 151 aaKnown RBP1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 PPP2R5CQ13362 524 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 RIPK1Q13546 671 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 SHHQ15465 462 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 CEBPEQ15744 281 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 C1orf100Q5SVJ3 147 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 CTRB2Q6GPI1 263 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 RAB12Q6IQ22 244 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 UNC5DQ6UXZ4 953 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 GDPD3Q7L5L3 318 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 ZNF619Q8N2I2 560 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 C6orf223Q8N319 242 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 CATSPER1Q8NEC5 780 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 OR6X1Q8NH79 312 aa1.27□□□□□ -2.21
RNU6-541P-201ENST00000384709 BRSK1Q8TDC3 778 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms