RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 CHI3L1P36222 383 aaPredicted RBP12.54□□□□□ -0.4
SHOX-202ENST00000381575 OR3A2P47893 321 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 DIO1P49895 249 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 KHKP50053 298 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 BSPH1Q075Z2 132 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 CASP8Q14790 479 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 SMU1Q2TAY7 513 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 FAM174BQ3ZCQ3 159 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 GPAT3Q53EU6 434 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 CEP85LQ5SZL2 805 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 NCMAPQ5T1S8 102 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ATAD3BQ5T9A4 648 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 SAXO2Q658L1 398 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ADAM5Q6NVV9 412 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 FRRS1Q6ZNA5 592 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ZNF611Q8N823 705 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ANKRD42Q8N9B4 389 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 MAPK1IP1LQ8NDC0 245 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ZNF75CPQ92670 426 aaPredicted RBP12.54□□□□□ -0.4
SHOX-202ENST00000381575 ROPN1LQ96C74 230 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 SLC35A5Q9BS91 424 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 PARD6BQ9BYG5 372 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 OR11A1Q9GZK7 315 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 OR10A4Q9H209 315 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 BCO1Q9HAY6 547 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 ACER3Q9NUN7 267 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 EXD2Q9NVH0 621 aa12.54□□□□□ -0.4
SHOX-202ENST00000381575 MARCOQ9UEW3 520 aaPredicted RBP12.54□□□□□ -0.4
SHOX-202ENST00000381575 SULT2B1O00204 365 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 AP3D1O14617 1153 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 DNAJA2O60884 412 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 CD3EP07766 207 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 LBPP18428 481 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 IL12AP29459 219 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 PGM1P36871 562 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 CDKN1AP38936 164 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 UFM1P61960 85 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 CHRNEQ04844 493 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 BST1Q10588 318 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 FAPQ12884 760 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 STX3Q13277 289 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ITGADQ13349 1161 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ANXA8L1Q5VT79 327 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 Q6ZT83 130 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 RNF130Q86XS8 419 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ANKFN1Q8N957 763 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 FAM71CQ8NEG0 241 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ZNF563Q8TA94 476 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 PNPT1Q8TCS8 783 aaKnown RBP12.53□□□□□ -0.4
SHOX-202ENST00000381575 CNOT9Q92600 299 aaKnown RBP12.53□□□□□ -0.4
SHOX-202ENST00000381575 TESCQ96BS2 214 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ARL5BQ96KC2 179 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 INPP5KQ9BT40 448 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 HDHD5Q9BXW7 423 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 POTEKPQ9BYX7 375 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
SHOX-202ENST00000381575 ZNF701Q9NV72 531 aaPredicted RBP12.53□□□□□ -0.4
SHOX-202ENST00000381575 CHD3Q12873 2000 aaKnown RBP12.52□□□□□ -0.4
SHOX-202ENST00000381575 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 DPRXA6NFQ7 191 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 INAFM1C9JVW0 142 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 E9PBE3 544 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 HMGN4O00479 90 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 SDHDO14521 159 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 TM9SF1O15321 606 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 RAMP1O60894 148 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 GSNP06396 782 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 PTNP21246 168 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 IGHV1-2P23083 117 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 S100A3P33764 101 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 CDKN2CP42773 168 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 TNK1Q13470 666 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 SYPL1Q16563 259 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 ABLIM2Q6H8Q1 611 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 TMPPEQ6ZT21 453 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 TMEM234Q8WY98 164 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 FBXW5Q969U6 566 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 ARL8AQ96BM9 186 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 NEURL3Q96EH8 262 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 CCDC106Q9BWC9 280 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 ESRP2Q9H6T0 727 aaKnown RBP12.52□□□□□ -0.41
SHOX-202ENST00000381575 MEAF6Q9HAF1 191 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 SSU72Q9NP77 194 aaKnown RBP12.52□□□□□ -0.41
SHOX-202ENST00000381575 SERINC1Q9NRX5 453 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
SHOX-202ENST00000381575 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.52□□□□□ -0.41
SHOX-202ENST00000381575 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
SHOX-202ENST00000381575 A0A1W2PR80 420 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 NDUFS7O75251 213 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 CHRM4P08173 479 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms