RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PTHLHP12272 177 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 HIST1H1TP22492 207 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 PPM1AP35813 382 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 NAA10P41227 235 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 S100A12P80511 92 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 TRAM2Q15035 370 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 HNRNPA1L2Q32P51 320 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 C1orf94Q6P1W5 598 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 CXXC5Q7LFL8 322 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 HDDC3Q8N4P3 179 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 OR2A1Q8NGT9 310 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 CNOT9Q92600 299 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 NARS2Q96I59 477 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 CAMK1GQ96NX5 476 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 ARHGAP9Q9BRR9 750 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 CACNG6Q9BXT2 260 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 STARD5Q9NSY2 213 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 TMEM74BQ9NUR3 256 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 ICKQ9UPZ9 632 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 SF3B6Q9Y3B4 125 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 RAB19A4D1S5 217 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 LRRN3E7EW58 273 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 L7N2F9 121 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 PEX12O00623 359 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 MAN2B1O00754 1011 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 EIF4EP06730 217 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC25A35Q3KQZ1 300 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 TRMT12Q53H54 448 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 FAM198BQ6UWH4 519 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 QSOX2Q6ZRP7 698 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 CEACAM19Q7Z692 300 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF761Q86XN6 746 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 BOLLQ8N9W6 283 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 OR4D10Q8NGI6 311 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 OR14C36Q8NHC7 312 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 SUN3Q8TAQ9 357 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF707Q96C28 371 aaPredicted RBP11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC35A4Q96G79 324 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC41A3Q96GZ6 507 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 OR2M2Q96R28 347 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 LRRN3Q9H3W5 708 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 DPEP2Q9H4A9 486 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 FLVCR2Q9UPI3 526 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 WDR45Q9Y484 360 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF780BQ9Y6R6 833 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 SOX30O94993 753 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 MT-ND4P03905 459 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 RAB3BP20337 219 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 OR12D2P58182 307 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ST3GAL3Q11203 375 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 RAB40BQ12829 278 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SERTAD2Q14140 314 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ODF4Q2M2E3 257 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC16A13Q7RTY0 426 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF433Q8N7K0 673 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 OR52E1Q8NGJ3 308 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC38A3Q99624 504 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 IER2Q9BTL4 223 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 WDR26Q9H7D7 661 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PTTG3PQ9NZH4 202 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SIGLEC6O43699 453 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SELENOFO60613 162 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ZIC2O95409 532 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 FGF2P09038 288 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SULT1A3P0DMM9 295 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SULT1A4P0DMN0 295 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SNRPBP14678 240 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 GABRA5P31644 462 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PRDX1Q06830 199 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 EXOSC7Q15024 291 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 GSG1Q2KHT4 349 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 TMEM201Q5SNT2 666 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SFRP4Q6FHJ7 346 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 METAP1DQ6UB28 335 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 GDF7Q7Z4P5 450 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ZFP82Q8N141 532 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 C17orf47Q8NEP4 570 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 OR13C2Q8NGS9 318 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 CCL4L1Q8NHW4 92 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 CHFRQ96EP1 664 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 WDR34Q96EX3 536 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ABHD1Q96SE0 405 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ALG8Q9BVK2 526 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 IGFLR1Q9H665 355 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 APOBEC3BQ9UH17 382 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PHF11Q9UIL8 331 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 A0A1B0GVI7 797 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SGCEO43556 437 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 CDC123O75794 336 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 THY1P04216 161 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 CISD3P0C7P0 127 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PVRP15151 417 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 BMP7P18075 431 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 MPIP34949 423 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 CLDN12P56749 244 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PRR5P85299 388 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF155Q12901 538 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 MINDY4Q4G0A6 757 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 TP53I3Q53FA7 332 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms