RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 SIGLEC7Q9Y286 467 aa8.07□□□□□ -1.12
TRIM6-203ENST00000380107 SPEF1Q9Y4P9 236 aa8.07□□□□□ -1.12
TRIM6-203ENST00000380107 C7orf66A4D0T2 115 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 FAM86C2PA6NEL3 165 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PRICKLE3O43900 615 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 NFATC1O95644 943 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TFP02787 698 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CEACAM5P06731 702 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 NGFRP08138 427 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 H2AFB2P0C5Z0 115 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 SEC13P55735 322 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 RPE65Q16518 533 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PYHIN1Q6K0P9 492 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 Q6ZTK2 550 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 GLRX5Q86SX6 157 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 RANBP3LQ86VV4 465 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 LNX2Q8N448 690 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 ZNF433Q8N7K0 673 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TMEM52Q8NDY8 209 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 OR52E2Q8NGJ4 325 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 OR2T35Q8NGX2 323 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 ZNF671Q8TAW3 534 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 BRIX1Q8TDN6 353 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 MOAP1Q96BY2 351 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TEX101Q9BY14 249 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 OR10A4Q9H209 315 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 ANKRD19PQ9H560 264 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 METTL17Q9H7H0 456 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CACYBPQ9HB71 228 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CMC2Q9NRP2 79 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 B3GNT2Q9NY97 397 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 ADAM18Q9Y3Q7 739 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CEP290O15078 2479 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TDRD6O60522 2096 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TRABD2BA6NFA1 517 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 ACOD1A6NK06 481 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PRKNO60260 465 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CTSVO60911 334 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 RNGTTO60942 597 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 GATBO75879 557 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PDGFAP04085 211 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 EPXP11678 715 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 DNASE1P24855 282 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 POU6F2P78424 691 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 RGS1Q08116 209 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 SNTB2Q13425 540 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CAMK2DQ13557 499 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 SUZ12Q15022 739 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TMEM44Q2T9K0 475 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 DCST2Q5T1A1 773 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PRAMEF8Q5VWM4 474 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PRAMEF7Q5VXH5 474 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 VITQ6UXI7 678 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 LINGO2Q7L985 606 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CHMP1BQ7LBR1 199 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 KANSL1Q7Z3B3 1105 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 LUZP2Q86TE4 346 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 OR4C6Q8NH72 309 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 OR10G6Q8NH81 332 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 LRRC20Q8TCA0 184 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 LCN9Q8WX39 176 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 CNOT9Q92600 299 aaKnown RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 SMARCD2Q92925 531 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 RBCK1Q9BYM8 510 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 PITHD1Q9GZP4 211 aaPredicted RBP8.06□□□□□ -1.12
TRIM6-203ENST00000380107 STARD5Q9NSY2 213 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 KLK11Q9UBX7 282 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 TBC1D29Q9UFV1 150 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 GNG8Q9UK08 70 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 RCE1Q9Y256 329 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 WDFY3Q8IZQ1 3526 aa8.06□□□□□ -1.12
TRIM6-203ENST00000380107 SEC16AO15027 2179 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 A0A1B0GVT2 93 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 SLC22A31A6NKX4 558 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 DUXAA6NLW8 204 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 RIIAD1A6NNX1 92 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 H0Y8X5 98 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 FKTNO75072 461 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 LYPD3O95274 346 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 TPOP07202 933 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 CT62P0C5K7 136 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 PVRP15151 417 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 NT5EP21589 574 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 BMP8BP34820 402 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 GABRA3P34903 492 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 GDNFP39905 211 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 VEGFCP49767 419 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 GDI2P50395 445 aaKnown RBP8.05□□□□□ -1.12
TRIM6-203ENST00000380107 CST6Q15828 149 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 NNATQ16517 81 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 NDUFAF6Q330K2 333 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 ARHGAP11BQ3KRB8 267 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 DMKNQ6E0U4 476 aaPredicted RBP8.05□□□□□ -1.12
TRIM6-203ENST00000380107 BMP8AQ7Z5Y6 402 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 PXKQ7Z7A4 578 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 COMMD7Q86VX2 200 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 CMTM4Q8IZR5 234 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 COX18Q8N8Q8 333 aa8.05□□□□□ -1.12
TRIM6-203ENST00000380107 MFSD9Q8NBP5 474 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms