RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GSTK1Q9Y2Q3 226 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 CAB39Q9Y376 341 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 EML5Q05BV3 1969 aa9.64□□□□□ -0.87
POLR2J3-201ENST00000379340 IGKV3D-11A0A0A0MRZ8 115 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 IQCMA0A1B0GVH7 501 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 FRG2CA6NGY1 282 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 PRR23D1E9PI22 279 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 K7ESF4 209 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 HRKO00198 91 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 TOX3O15405 576 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 UPK1BO75841 260 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SNX4O95219 450 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 IL33O95760 270 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 PRR23D2P0DMB1 279 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF3P17036 446 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 HK1P19367 917 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 BCKDHBP21953 392 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 FGF9P31371 208 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 RORAP35398 523 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ATP6V1E1P36543 226 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 OR1D5P58170 312 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 PSPHP78330 225 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 POU4F2Q12837 409 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 GPR50Q13585 617 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 KRR1Q13601 381 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ELAVL1Q15717 326 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SPANXN2Q5MJ10 180 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 WDR74Q6RFH5 385 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 TTLL10Q6ZVT0 673 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 BTLAQ7Z6A9 289 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF554Q86TJ5 538 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 CACTIN-AS1Q8N1I8 211 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 FAM71CQ8NEG0 241 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 OR4C6Q8NH72 309 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC2A12Q8TD20 617 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 CEP19Q96LK0 163 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 KCTD7Q96MP8 289 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 NDC1Q9BTX1 674 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SMURF1Q9HCE7 757 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 MEPEQ9NQ76 525 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 TXNL4BQ9NX01 149 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ERVK13-1Q9NX77 482 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 KLHL21Q9UJP4 597 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 TMEM184BQ9Y519 407 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 A0A087WUJ7 227 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 CCDC163A0A0D9SF12 145 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 TRDV1A0A1B0GX56 115 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 J3QRE1 110 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 MAGEB3O15480 346 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 LRP3O75074 770 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SPINK2P20155 84 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 FBLP22087 321 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 RPS19P39019 145 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ARRB1P49407 418 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC37A1P57057 533 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 KLHL26Q53HC5 615 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 OR2G6Q5TZ20 316 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 NKAIN2Q5VXU1 208 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 PLBD1Q6P4A8 553 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 CD200R1LQ6Q8B3 271 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 PLEKHG7Q6ZR37 379 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 OAFQ86UD1 273 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 CCDC190Q86UF4 302 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 TMEM151BQ8IW70 566 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC35F3Q8IY50 421 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 CADM2Q8N3J6 435 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 METTL27Q8N6F8 245 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ACBD7Q8N6N7 88 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 OR13C2Q8NGS9 318 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 OR14A16Q8NHC5 309 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 PTPMT1Q8WUK0 201 aaPredicted RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 GATAD2BQ8WXI9 593 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SGTBQ96EQ0 304 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 WDFY2Q96P53 400 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SECISBP2Q96T21 854 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SMOC1Q9H4F8 434 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SP140LQ9H930 580 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 UBQLN4Q9NRR5 601 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ASB6Q9NWX5 421 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 HAO2Q9NYQ3 351 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SERTAD3Q9UJW9 196 aa9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
POLR2J3-201ENST00000379340 ASPMQ8IZT6 3477 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 GCN1Q92616 2671 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 TCRBV16S1A1N1A0A5B0 115 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SCDO00767 359 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SOCS6O14544 535 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 NDUFB2O95178 105 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC2A10O95528 541 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 HLA-DPB1P04440 258 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 PNMTP11086 282 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 PEPDP12955 493 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 PNLIPP16233 465 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 CD53P19397 219 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 HOXA6P31267 233 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SEPHS1P49903 392 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms