RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 CXCR1P25024 350 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 MST1P26927 711 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 GGT2P36268 569 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 LSM11P83369 360 aaKnown RBP eCLIP22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 OR4K17Q8NGC6 315 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 PFN4Q8NHR9 129 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 KCNE4Q8WWG9 221 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 DTNBP1Q96EV8 351 aa22.35■■□□□ 1.17
ECHDC3-201ENST00000379215 MAGEA13PA6NCF6 341 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 ARGFXA6NJG6 315 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 ZAR1LA6NP61 321 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 KPNA4O00629 521 aaPredicted RBP22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 TNFAIP8O95379 198 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 CCL3P10147 92 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 GPR4P46093 362 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 MAP2K6P52564 334 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 CDC42P60953 191 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 PTGES3Q15185 160 aaKnown RBP22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 PRAMEF20Q5VT98 475 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 C5orf46Q6UWT4 87 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 SLC43A2Q8N370 569 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 FADS6Q8N9I5 356 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 ZNF248Q8NDW4 579 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 TEX47Q8TBZ9 253 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 OSTF1Q92882 214 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 NTNG2Q96CW9 530 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 TMEM41AQ96HV5 264 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 GPA33Q99795 319 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 UTP23Q9BRU9 249 aaKnown RBP22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 TEX12Q9BXU0 123 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 TIMMDC1Q9NPL8 285 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 MEPEQ9NQ76 525 aaPredicted RBP22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 MED11Q9P086 117 aa22.34■■□□□ 1.17
ECHDC3-201ENST00000379215 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 UNC119BA6NIH7 251 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 ETV2O00321 342 aaPredicted RBP22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 GMFGO60234 142 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 POU1F1P28069 291 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 OC90Q02509 493 aaPredicted RBP22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 CRYZQ08257 329 aaKnown RBP22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 RAPSNQ13702 412 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 PLCZ1Q86YW0 608 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 GATA6Q92908 595 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 SGTBQ96EQ0 304 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 SCNM1Q9BWG6 230 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 PRRG3Q9BZD7 231 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 DPH1Q9BZG8 443 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 OSGIN1Q9UJX0 560 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 CDH10Q9Y6N8 788 aa22.33■■□□□ 1.17
ECHDC3-201ENST00000379215 A0A087WZY1 265 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 C2orf72A6NCS6 295 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 EFCAB9A8MZ26 197 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 SNPHO15079 494 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 NKX2-8O15522 239 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 SLC25A12O75746 678 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 NTN1O95631 604 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 SAGP10523 405 aaPredicted RBP22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 EPHA2P29317 976 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 APOBEC1P41238 236 aaKnown RBP22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 MASP1P48740 699 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 SLC9A3P48764 834 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 CDC20Q12834 499 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 TOMM34Q15785 309 aaPredicted RBP22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 ZNF468Q5VIY5 522 aaPredicted RBP22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 AGAP7PQ5VUJ5 663 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 OR5M10Q6IEU7 315 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 OR2M3Q8NG83 312 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 MRGPRX4Q96LA9 322 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 AGAP4Q96P64 663 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 YTHDF1Q9BYJ9 559 aaKnown RBP22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 DSN1Q9H410 356 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 C20orf141Q9NUB4 165 aa22.32■■□□□ 1.16
ECHDC3-201ENST00000379215 ENO4A6NNW6 628 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 C17orf51A8MQB3 221 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 MPZL2O60487 215 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 SOX14O95416 240 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 PRKAR1AP10644 381 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 PRKCAP17252 672 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 IL5RAQ01344 420 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 ATP1A1-AS1Q5TC04 95 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 BROXQ5VW32 411 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 ZNF620Q6ZNG0 422 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 PSD4Q8NDX1 1056 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 MED17Q9NVC6 651 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 IMPAD1Q9NX62 359 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 IL20Q9NYY1 176 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 LRFN1Q9P244 771 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 MSRB2Q9Y3D2 182 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 GNB5O14775 395 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 HCN1O60741 890 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 RCBTB2O95199 551 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 EIF1P41567 113 aaKnown RBP22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 SMSP52788 366 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 ISL1P61371 349 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 SLC25A53Q5H9E4 307 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 SLX4IPQ5VYV7 408 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 ISLR2Q6UXK2 745 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 WDSUB1Q8N9V3 476 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 C1GALT1C1Q96EU7 318 aa22.31■■□□□ 1.16
ECHDC3-201ENST00000379215 SLC25A19Q9HC21 320 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms