RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 TEPSINQ96N21 525 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 NDFIP1Q9BT67 221 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 THSD1Q9NS62 852 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 WDR81Q562E7 1941 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 G3V3Y1 287 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SLC31A1O15431 190 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RAD1O60671 282 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MSX1P28360 303 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 PTGER4P35408 488 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 HSD17B7P56937 341 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 HBMQ6B0K9 141 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 CNTN4Q8IWV2 1026 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 OR2T27Q8NH04 317 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DYNC2LI1Q8TCX1 351 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 SRMSQ9H3Y6 488 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ANKRD19PQ9H560 264 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RNF24Q9Y225 148 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 HAS3O00219 553 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 ADAM23O75077 832 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 KLRC2P26717 231 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 DLK1P80370 383 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 NHLH1Q02575 133 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 NHLH2Q02577 135 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 CATR1Q13166 79 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 RAB32Q13637 225 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 TXNRD3Q86VQ6 643 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 WDR20Q8TBZ3 569 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 NMUR1Q9HB89 426 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 MYOTQ9UBF9 498 aa8.24□□□□□ -1.09
LIG3-202ENST00000378526 KIF1AQ12756 1690 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 RHOQP17081 205 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 F2RP25116 425 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 TGFBR1P36897 503 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 SLBPQ14493 270 aaKnown RBP eCLIP8.23□□□□□ -1.09
LIG3-202ENST00000378526 SYT6Q5T7P8 510 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 LRRC52Q8N7C0 313 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 NAT8LQ8N9F0 302 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ZNF384Q8TF68 577 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SLC7A6Q92536 515 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SENP8Q96LD8 212 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 FOXN4Q96NZ1 517 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 MMP26Q9NRE1 261 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 C1GALT1Q9NS00 363 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 CUTCQ9NTM9 273 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LRIT1Q9P2V4 623 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PRODH2Q9UF12 536 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PITPNC1Q9UKF7 332 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 NENFQ9UMX5 172 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 UNC13BO14795 1591 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 B4E171 279 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 NDUFS4O43181 175 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 TCRBP04435 133 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GALTP07902 379 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 TAS2R45P59539 299 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ERVFRD-1P60508 538 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 B2MP61769 119 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ADARB1P78563 741 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 BTG3Q14201 252 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 CDONQ4KMG0 1287 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 TMEM184AQ6ZMB5 413 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR6M1Q8NGM8 313 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 TRIB3Q96RU7 358 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GPR22Q99680 433 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PTDSS2Q9BVG9 487 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 STEAP1Q9UHE8 339 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PGAP2Q9UHJ9 254 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GDF2Q9UK05 429 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 ATXN7L1Q9ULK2 861 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR51F1A6NGY5 319 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 H3BVH4 76 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 TMEM11P17152 192 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 EFNA1P20827 205 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 MPGP29372 298 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR1E2P47887 323 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 CCR6P51684 374 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 CLCN3P51790 818 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PPP1R8Q12972 351 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 PRAMEF14Q5SWL7 426 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SHEQ5VZ18 495 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 BRAT1Q6PJG6 821 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 THOC6Q86W42 341 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 C11orf42Q8N5U0 333 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 L3MBTL4Q8NA19 623 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ZFP62Q8NB50 900 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 MCHR2Q969V1 340 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SORBS1Q9BX66 1292 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 PECRQ9BY49 303 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 NXF2Q9GZY0 626 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 EVA1AQ9H8M9 152 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GOLGA2P5Q9HBQ8 144 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 POLLQ9UGP5 575 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PADI1Q9ULC6 663 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ATF5Q9Y2D1 282 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 TEX264Q9Y6I9 313 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SELENOFO60613 162 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SPATA31D3P0C874 917 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 MDH2P40926 338 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 SLC6A12P48065 614 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms