RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CLPSP04118 112 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 IFI6P09912 130 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 BCKDHBP21953 392 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 DEFA1P59665 94 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 DEFA3P59666 94 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 DAB2P98082 770 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 C14orf28Q4W4Y0 310 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 ULK3Q6PHR2 472 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 MED25Q71SY5 747 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 PRR22Q8IZ63 422 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 FAM174AQ8TBP5 190 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 SENP5Q96HI0 755 aaPredicted RBP17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 SMAD5Q99717 465 aaKnown RBP17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 ADAM18Q9Y3Q7 739 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
PCDHA4-201ENST00000378125 LMO7DNF2Z398 122 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 NPIPB9F8W1W9 429 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 IMPA2O14732 288 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 SERPINI2O75830 405 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 OR2B3O76000 313 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 ZNF3P17036 446 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 HSD17B7P56937 341 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 HNRNPKP61978 463 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 RPL13AP3Q6NVV1 102 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 CD200R1LQ6Q8B3 271 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 RPTNQ6XPR3 784 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 RTL4Q6ZR62 310 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 ZNF550Q7Z398 422 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 RFLNBQ8N5W9 214 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 LSMEM1Q8N8F7 131 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 FAM98AQ8NCA5 519 aaKnown RBP17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 ZNF285Q96NJ3 590 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 ZNF426Q9BUY5 554 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 CUTCQ9NTM9 273 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 SLC35A3Q9Y2D2 325 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 FABP12A6NFH5 140 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 MCIDASD6RGH6 385 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 J3QLW9 94 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 SNPHO15079 494 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 ZNF749O43361 778 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 HLA-DPB1P04440 258 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 ZNF19P17023 458 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 FGF9P31371 208 aaPredicted RBP17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 NXPH1P58417 271 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 TMEM91Q6ZNR0 172 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 PTPMT1Q8WUK0 201 aaPredicted RBP17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 DNAJA3Q96EY1 480 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 CCDC32Q9BV29 185 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 BABAM2Q9NXR7 383 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 IER3IP1Q9Y5U9 82 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
PCDHA4-201ENST00000378125 CDC14CA4D256 554 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 OIP5O43482 229 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 RNF13O43567 381 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 HIST1H1CP16403 213 aaKnown RBP17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 HK1P19367 917 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 ARL4DP49703 201 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 GRM7Q14831 915 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 CD226Q15762 336 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 TCTE1Q5JU00 501 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 ARL9Q6T311 187 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 NRARPQ7Z6K4 114 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SIX5Q8N196 739 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 UBE2J2Q8N2K1 259 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 ZMYND19Q96E35 227 aaPredicted RBP17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 ZDHHC12Q96GR4 267 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 NEDD4LQ96PU5 975 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 NRSN2Q9GZP1 204 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SRRQ9GZT4 340 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SIAEQ9HAT2 523 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SLC22A31A6NKX4 558 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 PEPDP12955 493 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SLC6A6P31641 620 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 RPL4P36578 427 aaKnown RBP17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 TPTEP56180 551 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 FOXL2P58012 376 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 COPZ1P61923 177 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 E2F1Q01094 437 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 DDI2Q5TDH0 399 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 CBLN3Q6UW01 205 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SSX6Q7RTT6 188 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SMPDL3BQ92485 455 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 C4orf36Q96KX1 117 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 UCK1Q9HA47 277 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 ADGRL4Q9HBW9 690 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 SEC16AO15027 2179 aa17.66■□□□□ 0.42
PCDHA4-201ENST00000378125 HPGDSO60760 199 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 TMCC2O75069 709 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 APOA1P02647 267 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 SBK2P0C263 348 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 IL7P13232 177 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 OR12D2P58182 307 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 SLC3A1Q07837 685 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 GALEQ14376 348 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 FAM27D1Q5T7N8 215 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 C1orf189Q5VU69 101 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 LINC00114Q6XXX2 140 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 C17orf82Q86X59 251 aaPredicted RBP17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 ZSCAN1Q8NBB4 408 aa17.65■□□□□ 0.42
PCDHA4-201ENST00000378125 OR5W2Q8NH69 310 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms