RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 XKRXQ6PP77 449 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 LSMEM1Q8N8F7 131 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 SMYD1Q8NB12 490 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 OR2V1Q8NHB1 315 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 WNT2BQ93097 391 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 ADGRG7Q96K78 797 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TM9SF2Q99805 663 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF559Q9BR84 538 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 TIGARQ9NQ88 270 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 COQ3Q9NZJ6 369 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 CHRNA9Q9UGM1 479 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF175Q9Y473 711 aa11.92□□□□□ -0.5
CKAP2-202ENST00000378034 MED12Q93074 2177 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 MBD3L4A6NDZ8 208 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 MBD3L3A6NE82 208 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 MBD3L5A6NJ08 208 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 B2RBV5 119 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 EIF1AYO14602 144 aaKnown RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF208O43345 1280 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 OPN1SWP03999 348 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 PRG2P13727 222 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 IL11P20809 199 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 CD247P20963 164 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 HTR1EP28566 365 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF136P52737 540 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 RGS8P57771 180 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ADORA2A-AS1P86434 159 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 SLC25A3Q00325 362 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 CTU2Q2VPK5 515 aaKnown RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 SAMD4BQ5PRF9 694 aaKnown RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 MYO7BQ6PIF6 2116 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 RANBP3LQ86VV4 465 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 RPRMLQ8N4K4 120 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF808Q8N4W9 903 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 MBD3L2Q8NHZ7 208 aaPredicted RBP11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ASB5Q8WWX0 329 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ZFP3Q96NJ6 502 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 ARHGDIGQ99819 225 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 TRIM2Q9C040 744 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 C12orf10Q9HB07 376 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 CTPS2Q9NRF8 586 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 CLCF1Q9UBD9 225 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 OSGIN1Q9UJX0 560 aa11.91□□□□□ -0.5
CKAP2-202ENST00000378034 A0A0J9YW62 118 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 HSPB2A8KAH6 182 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CXCR6O00574 342 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 FMO6PO60774 539 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 ZG16O60844 167 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 IL2RAP01589 272 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 FESP07332 822 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 T-ENOLP0DO92 83 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 HSD17B1P14061 328 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 TACR3P29371 465 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CEACAM8P31997 349 aaPredicted RBP11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CPOXP36551 454 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CRYBA2P53672 197 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 NCALDP61601 193 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 HSPB2Q16082 182 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SGCBQ16585 318 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 NRF1Q16656 503 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 TMEM176BQ3YBM2 270 aaPredicted RBP11.9□□□□□ -0.5
CKAP2-202ENST00000378034 COMTD1Q86VU5 262 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 ADGRG3Q86Y34 549 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 DEFB107AQ8IZN7 70 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CADM2Q8N3J6 435 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 GPR32P1Q8NGA4 272 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 OR10D3Q8NH80 312 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 PROX1Q92786 737 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CDRT15Q96T59 188 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 C1orf21Q9H246 121 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 RPS6KB2Q9UBS0 482 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SLC9A8Q9Y2E8 581 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
CKAP2-202ENST00000378034 RELNP78509 3460 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 TMED7-TICAM2A0A0A6YYA0 188 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 FRS3O43559 492 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 GMNNO75496 209 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 FCGR2AP12318 317 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SLC7A1P30825 629 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SFTPDP35247 375 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 EIF1AXP47813 144 aaKnown RBP11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CARD18P57730 90 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CYBRD1Q53TN4 286 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SYT14P1Q58G82 188 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 HBMQ6B0K9 141 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SEM1Q6ZVN7 128 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 MRGPRGQ86SM5 289 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 OR52E4Q8NGH9 312 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 DNAJA4Q8WW22 397 aaPredicted RBP11.9□□□□□ -0.5
CKAP2-202ENST00000378034 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.5
CKAP2-202ENST00000378034 LZICQ8WZA0 190 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 FIG4Q92562 907 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 TMEM27Q9HBJ8 222 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 ADPRHL2Q9NX46 363 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 CD300AQ9UGN4 299 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 TMED7Q9Y3B3 224 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 HDGFL3Q9Y3E1 203 aa11.9□□□□□ -0.5
CKAP2-202ENST00000378034 SLC22A20A6NK97 555 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms