RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 THOC7Q6I9Y2 204 aaKnown RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 RTL10Q7L3V2 364 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 LINGO2Q7L985 606 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 CDRT4Q8N9R6 151 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 RPLP0P6Q8NHW5 317 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 DEDD2Q8WXF8 326 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 TSSK2Q96PF2 358 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 NMNAT3Q96T66 252 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 NKX2-4Q9H2Z4 354 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SLC28A3Q9HAS3 691 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 CPNE7Q9UBL6 633 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 MN1Q10571 1320 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 ACOD1A6NK06 481 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SLC22A31A6NKX4 558 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 PLRG1O43660 514 aaKnown RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 IFNGP01579 166 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 GIFP27352 417 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SFXN4Q6P4A7 337 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SAMD14Q8IZD0 417 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 TOMM5Q8N4H5 51 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 OR13H1Q8NG92 308 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 OR4D9Q8NGE8 314 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 OR5M3Q8NGP4 307 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 BMFQ96LC9 184 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 HSPA12BQ96MM6 686 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 TMEM43Q9BTV4 400 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SRA1Q9HD15 236 aaKnown RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 MEPEQ9NQ76 525 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 H7C1C5 153 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 F8A1P23610 371 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 LCN6P62502 163 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 NFATC4Q14934 902 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 DUSP6Q16828 381 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 TMEM44Q2T9K0 475 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 ALG11Q2TAA5 492 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 ZNF655Q8N720 491 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 DNAJA4Q8WW22 397 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 OR14A2Q96R54 314 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SNX18Q96RF0 628 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 PRSS27Q9BQR3 290 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 CDCP1Q9H5V8 836 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 IKZF2Q9UKS7 526 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 CYP8B1Q9UNU6 501 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 RAD1O60671 282 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 MT-ND4P03905 459 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 SBK2P0C263 348 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 PTHLHP12272 177 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 FGF9P31371 208 aaPredicted RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 BTG2P78543 158 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 EOGTQ5NDL2 527 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 RDH10Q8IZV5 341 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 OR2L13Q8N349 312 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 OR52N1Q8NH53 320 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 PPP1R3EQ9H7J1 279 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 FAM60AQ9NP50 221 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 C19orf53Q9UNZ5 99 aaPredicted RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 FZD7O75084 574 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 CSTAP01040 98 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 HIST1H1CP16403 213 aaKnown RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 RAB3BP20337 219 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 RPS5P46782 204 aaKnown RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 PITPNBP48739 271 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 ATP12AP54707 1039 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 FXYD6P3P58550 94 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 EFNB1P98172 346 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 DUSP8Q13202 625 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 FCN2Q15485 313 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 PRR22Q8IZ63 422 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 GRPEL2Q8TAA5 225 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 SLC37A2Q8TED4 501 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 THAP4Q8WY91 577 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 RIT1Q92963 219 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 RASD2Q96D21 266 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 GAL3ST4Q96RP7 486 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 ABHD1Q96SE0 405 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 NKX3-1Q99801 234 aaPredicted RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 TP53BP1Q12888 1972 aaPredicted RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 C4orf47A7E2U8 309 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 KHNYNO15037 678 aaKnown RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 DHFRP00374 187 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 ST6GAL1P15907 406 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 MAOAP21397 527 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 EEF1A1P68104 462 aaKnown RBP11.94□□□□□ -0.5
USP11-204ENST00000377107 MAB21L1Q13394 359 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 EFR3AQ14156 821 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 KIR2DS3Q14952 304 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 MRGPRX1Q96LB2 322 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 STMN3Q9NZ72 180 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 LRIT1Q9P2V4 623 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 PIAS3Q9Y6X2 628 aa11.94□□□□□ -0.5
USP11-204ENST00000377107 ASXL3Q9C0F0 2248 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 CDC14CA4D256 554 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 C2orf74A8MZ97 194 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms