RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ARL14Q8N4G2 192 aa15.28■□□□□ 0.04
TRIM39-201ENST00000376656 CDS1Q92903 461 aa15.28■□□□□ 0.04
TRIM39-201ENST00000376656 MOAP1Q96BY2 351 aa15.28■□□□□ 0.04
TRIM39-201ENST00000376656 GIMAP5Q96F15 307 aa15.28■□□□□ 0.04
TRIM39-201ENST00000376656 MED9Q9NWA0 146 aa15.28■□□□□ 0.04
TRIM39-201ENST00000376656 KRBOX1C9JBD0 128 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 GALR3O60755 368 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-201ENST00000376656 LRG1P02750 347 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 GIPP09681 153 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-201ENST00000376656 GKN3PP0CG01 181 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 GDI2P50395 445 aaKnown RBP15.27■□□□□ 0.04
TRIM39-201ENST00000376656 HES5Q5TA89 166 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 DEFB128Q7Z7B8 93 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 SLC39A11Q8N1S5 342 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 SPICQ8N5J4 248 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 MEIOBQ8N635 442 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 ADAMTS15Q8TE58 950 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 KRCC1Q9NPI7 259 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-201ENST00000376656 RNF186Q9NXI6 227 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 CES1P1Q9UKY3 287 aa15.27■□□□□ 0.04
TRIM39-201ENST00000376656 OR2M5A3KFT3 312 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 TGM5O43548 720 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 CLTBP09497 229 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 HIST1H1TP22492 207 aaPredicted RBP15.27■□□□□ 0.03
TRIM39-201ENST00000376656 CERS1P27544 350 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 BCL6P41182 706 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 DPYSL5Q9BPU6 564 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 XKR8Q9H6D3 395 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 PLEKHA1Q9HB21 404 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 HCFC1R1Q9NWW0 138 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 CLDND1Q9NY35 253 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 PFDN2Q9UHV9 154 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 COL4A6Q14031 1691 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 OR6C65A6NJZ3 312 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 F3P13726 295 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 SLC2A5P22732 501 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 HTR2AP28223 471 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 MAT2AP31153 395 aaKnown RBP15.27■□□□□ 0.03
TRIM39-201ENST00000376656 ARFIP1P53367 373 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 LINC00303Q3SY05 128 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 FAM199XQ6PEV8 388 aaPredicted RBP15.27■□□□□ 0.03
TRIM39-201ENST00000376656 FAM111BQ6SJ93 734 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 ACTRT3Q9BYD9 372 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 LDAHQ9H6V9 325 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 PRDM7Q9NQW5 492 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 NTMQ9P121 344 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 FBXL2Q9UKC9 423 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 BAIAP2Q9UQB8 552 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 PCDHGA5Q9Y5G8 931 aa15.27■□□□□ 0.03
TRIM39-201ENST00000376656 TRAV27A0A087WT01 109 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 PCP4L1A6NKN8 68 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 ANXA2P2A6NMY6 339 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 KHDRBS3O75525 346 aaKnown RBP15.26■□□□□ 0.03
TRIM39-201ENST00000376656 IFNGR1P15260 489 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 RPS11P62280 158 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRIM39-201ENST00000376656 SLC48A1Q6P1K1 146 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 LRFN4Q6PJG9 635 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 OR6V1Q8N148 313 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 MS4A6EQ96DS6 147 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 PCBD2Q9H0N5 130 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 FBXO9Q9UK97 447 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-201ENST00000376656 ARPC5O15511 151 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 B3GALNT1O75752 331 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 UCHL1P09936 223 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 MPIP34949 423 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 RAP2BP61225 183 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 RIPPLY1Q0D2K3 151 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 ELFN2Q5R3F8 820 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 MRM1Q6IN84 353 aaKnown RBP15.26■□□□□ 0.03
TRIM39-201ENST00000376656 ASPGQ86U10 573 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 OR52B4Q8NGK2 314 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 TMEM239Q8WW34 195 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 ARRDC3Q96B67 414 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 SLC25A38Q96DW6 304 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 TCEAL4Q96EI5 215 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 PELI1Q96FA3 418 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 TTYH1Q9H313 450 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-201ENST00000376656 ANKRD10Q9NXR5 420 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 RABL2AQ9UBK7 228 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-201ENST00000376656 HRH3Q9Y5N1 445 aa15.26■□□□□ 0.03
TRIM39-201ENST00000376656 PDCD5O14737 125 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 ARL6IP5O75915 188 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 SERPINA3P01011 423 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 FGF2P09038 288 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 TYRP1P17643 537 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 ATRAIDQ6UW56 229 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 OR51A7Q8NH64 312 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 SCARB1Q8WTV0 552 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 THEM6Q8WUY1 208 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 LRIG1Q96JA1 1093 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 ZNF558Q96NG5 402 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 OR1F2PQ96R84 312 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 GFI1Q99684 422 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 PDCD1LG2Q9BQ51 273 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 IFT46Q9NQC8 304 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 ACSL5Q9ULC5 683 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 COPS3Q9UNS2 423 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.25■□□□□ 0.03
TRIM39-201ENST00000376656 WDR45Q9Y484 360 aa15.25■□□□□ 0.03
TRIM39-201ENST00000376656 CHURC1-FNTBB4DL54 471 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms