RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 AGAP6Q5VW22 663 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 ABLIM2Q6H8Q1 611 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 HEPHL1Q6MZM0 1159 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 TMEM108Q6UXF1 575 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 CMIPQ8IY22 773 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 APH1AQ96BI3 265 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 ADAD1Q96M93 576 aaKnown RBP13.07□□□□□ -0.32
HDAC6-204ENST00000376643 TMEM109Q9BVC6 243 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 OR51I1Q9H343 314 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 SSU72Q9NP77 194 aaKnown RBP13.07□□□□□ -0.32
HDAC6-204ENST00000376643 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-204ENST00000376643 CHRNA9Q9UGM1 479 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 MKLN1Q9UL63 735 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 LIPT1Q9Y234 373 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 RAP2CQ9Y3L5 183 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 FN1P02751 2386 aaKnown RBP13.07□□□□□ -0.32
HDAC6-204ENST00000376643 IGHV3-15A0A0B4J1V0 119 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 CIB4A0PJX0 185 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 OR5H1A6NKK0 313 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 ESPNB1AK53 854 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 INAFM1C9JVW0 142 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 TLX2O43763 284 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 TYROBPO43914 113 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 EIF1BO60739 113 aaKnown RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 LYZL6O75951 148 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 BMP4P12644 408 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 PTAFRP25105 342 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 CHI3L1P36222 383 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 ETV4P43268 484 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 MAGEA8P43361 318 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 ABCE1P61221 599 aaKnown RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 TNK1Q13470 666 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 PDCD2Q16342 344 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 OR7E24Q6IFN5 339 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 CROCCP2Q86T23 111 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 UBE2J2Q8N2K1 259 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 ARFGAP2Q8N6H7 521 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 FAM71CQ8NEG0 241 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 XAGE5Q8WWM1 108 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 PMM1Q92871 262 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 KLHDC3Q9BQ90 382 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 PARPBPQ9NWS1 579 aa13.06□□□□□ -0.32
HDAC6-204ENST00000376643 CISD1Q9NZ45 108 aaKnown RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 NOSIPQ9Y314 301 aaKnown RBP13.06□□□□□ -0.32
HDAC6-204ENST00000376643 RGS16O15492 202 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 FCMRO60667 390 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 MRPL33O75394 65 aaKnown RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 PGM3O95394 542 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 H6PDO95479 791 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 SOD3P08294 240 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 PGM1P36871 562 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 RNF144AP50876 292 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 RPL14P50914 215 aaKnown RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 CDH11P55287 796 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 DSCR9P59020 149 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 TGFBR3Q03167 851 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 TSC22D1Q15714 1073 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 CHI3L2Q15782 390 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 DTX2Q86UW9 622 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 CLECL1Q8IZS7 167 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 KBTBD8Q8NFY9 601 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 ROPN1LQ96C74 230 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 NEURL3Q96EH8 262 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 NAA11Q9BSU3 229 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 REG4Q9BYZ8 158 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 ASB6Q9NWX5 421 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 TAS2R16Q9NYV7 291 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 MARCOQ9UEW3 520 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 TRAPPC4Q9Y296 219 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 MAGED1Q9Y5V3 778 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-204ENST00000376643 USF3Q68DE3 2245 aa13.05□□□□□ -0.32
HDAC6-204ENST00000376643 JMJD1CQ15652 2540 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 CSPG4Q6UVK1 2322 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 GOLGA8QA0A0J9YX86 632 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 FAM234BA2RU67 622 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 GOLGA8OA6NCC3 632 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 CCT8L1PA6NM43 557 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 E9PBE3 544 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 GOLGA8NF8WBI6 632 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 CRLF1O75462 422 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 IFNA2P01563 188 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 OR12D1P0DN82 309 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 LBPP18428 481 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 PAX7P23759 505 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 ARRB2P32121 409 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 S100A3P33764 101 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SLC16A1P53985 500 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 VSNL1P62760 191 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SLC35A1P78382 337 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 KCNJ10P78508 379 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms