RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ZIC1Q15915 447 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 TMEM255AQ5JRV8 349 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
MSH5-203ENST00000375750 MRM1Q6IN84 353 aaKnown RBP14.04□□□□□ -0.16
MSH5-203ENST00000375750 BHLHB9Q6PI77 547 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 KIAA1324Q6UXG2 1013 aaKnown RBP14.04□□□□□ -0.16
MSH5-203ENST00000375750 COMMD7Q86VX2 200 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 ZNF527Q8NB42 609 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 GHSRQ92847 366 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 FAM131CQ96AQ9 280 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 TEAD3Q99594 435 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 TRIM36Q9NQ86 728 aa14.04□□□□□ -0.16
MSH5-203ENST00000375750 AK6Q9Y3D8 172 aaKnown RBP14.04□□□□□ -0.16
MSH5-203ENST00000375750 SHISA7A6NL88 538 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 PEX12O00623 359 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 BHLHE40O14503 412 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 SSNA1O43805 119 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 HMGN1P05114 100 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 CEACAM5P06731 702 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 MPIP34949 423 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 CAMK2DQ13557 499 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 GALEQ14376 348 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 KRT33BQ14525 404 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 DUSP5Q16690 384 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 GSG1Q2KHT4 349 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 CDC73Q6P1J9 531 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 SFXN5Q8TD22 340 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 EMC7Q9NPA0 242 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 BRD7Q9NPI1 651 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.03□□□□□ -0.16
MSH5-203ENST00000375750 WDR45Q9Y484 360 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 LINC00862A6NCI5 91 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 POM121BA6NF01 834 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 PEBP1P30086 187 aaKnown RBP14.03□□□□□ -0.16
MSH5-203ENST00000375750 SIM1P81133 766 aaPredicted RBP14.03□□□□□ -0.16
MSH5-203ENST00000375750 ZNF782Q6ZMW2 699 aaPredicted RBP14.03□□□□□ -0.16
MSH5-203ENST00000375750 SERPINA12Q8IW75 414 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 PGLYRP3Q96LB9 341 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 SORCS2Q96PQ0 1159 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 ACTRT3Q9BYD9 372 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 PRO3102Q9H379 93 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 CAPN10Q9HC96 672 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 OR6C2Q9NZP2 312 aa14.03□□□□□ -0.16
MSH5-203ENST00000375750 PPIEQ9UNP9 301 aaKnown RBP14.03□□□□□ -0.16
MSH5-203ENST00000375750 A0A087WV48 116 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 H0Y8X5 98 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 ZNF593O00488 134 aaPredicted RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 GMDSO60547 372 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 DNASE1P24855 282 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 NUDT1P36639 197 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 ANXA11P50995 505 aaKnown RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 TRA2BP62995 288 aaKnown RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 FOXK2Q01167 660 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 CRMP1Q14194 572 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 TRMT12Q53H54 448 aaKnown RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 Q6ZTK2 550 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 AHCYL2Q96HN2 611 aaKnown RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 APOOQ9BUR5 198 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 RANBP3Q9H6Z4 567 aaPredicted RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 C8orf33Q9H7E9 229 aaPredicted RBP14.02□□□□□ -0.16
MSH5-203ENST00000375750 DLL4Q9NR61 685 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 MED17Q9NVC6 651 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 ZNF224Q9NZL3 707 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 KCNE5Q9UJ90 142 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 SPTBP11277 2137 aa14.02□□□□□ -0.16
MSH5-203ENST00000375750 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 RPS10-NUDT3A0A1W2PQS6 291 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 IMPA2O14732 288 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 H2AFB2P0C5Z0 115 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 GAAP10253 952 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 PRKAR1BP31321 381 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 MRPS21P82921 87 aaKnown RBP14.02□□□□□ -0.17
MSH5-203ENST00000375750 PYHIN1Q6K0P9 492 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 FAAP20Q6NZ36 180 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 OR52E1Q8NGJ3 308 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 GRHL3Q8TE85 626 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 SMPDL3BQ92485 455 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 ZNF764Q96H86 408 aaPredicted RBP14.02□□□□□ -0.17
MSH5-203ENST00000375750 RBP7Q96R05 134 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 NDC1Q9BTX1 674 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 PCBD2Q9H0N5 130 aa14.02□□□□□ -0.17
MSH5-203ENST00000375750 METTL17Q9H7H0 456 aaPredicted RBP14.02□□□□□ -0.17
MSH5-203ENST00000375750 TP53BP1Q12888 1972 aaPredicted RBP14.02□□□□□ -0.17
MSH5-203ENST00000375750 PRR23D1E9PI22 279 aaPredicted RBP14.01□□□□□ -0.17
MSH5-203ENST00000375750 G3V3Q6 166 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 GNB5O14775 395 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 PPP1R3DO95685 299 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 MT-ND5P03915 603 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 PRR23D2P0DMB1 279 aaPredicted RBP14.01□□□□□ -0.17
MSH5-203ENST00000375750 SAGP10523 405 aaPredicted RBP14.01□□□□□ -0.17
MSH5-203ENST00000375750 RAB3BP20337 219 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 CDONQ4KMG0 1287 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 TMEM65Q6PI78 240 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 CHMP1BQ7LBR1 199 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 LUZP2Q86TE4 346 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 SPERTQ8NA61 448 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 OR2L5Q8NG80 312 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 HS6ST2Q96MM7 605 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 DERL3Q96Q80 235 aa14.01□□□□□ -0.17
MSH5-203ENST00000375750 TRAF4Q9BUZ4 470 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms