RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RCE1Q9Y256 329 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 AK6Q9Y3D8 172 aaKnown RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 FKBP7Q9Y680 259 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 CLEC3AO75596 197 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 RGS11O94810 467 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 DRD1P21728 446 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 NOS3P29474 1203 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 PRKAR1BP31321 381 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 MPIP34949 423 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 KIR2DL1P43626 348 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 IKZF1Q13422 519 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 OPCMLQ14982 345 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ARHGAP19Q14CB8 494 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 GARNL3Q5VVW2 1013 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 Q6ZTK2 550 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 GPAT4Q86UL3 456 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SLC16A11Q8NCK7 471 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 HMGB4Q8WW32 186 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ELMOD3Q96FG2 381 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 TEAD3Q99594 435 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 HDAC8Q9BY41 377 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ACTR6Q9GZN1 396 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 C6orf106Q9H6K1 298 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 C20orf141Q9NUB4 165 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SIDT1Q9NXL6 827 aaKnown RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 KCMF1Q9P0J7 381 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 FBXL4Q9UKA2 621 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF443Q9Y2A4 671 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-203ENST00000374877 RNF215Q9Y6U7 377 aa10.27□□□□□ -0.77
CCDC40-203ENST00000374877 SLC22A31A6NKX4 558 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 K7EQS6 105 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 FLRT2O43155 660 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 GMDSO60547 372 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 STX11O75558 287 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 TFP02787 698 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SLC35G4P0C7Q5 338 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 CTRB1P17538 263 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 MAKP20794 623 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 HIST1H1TP22492 207 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-203ENST00000374877 TRAM1Q15629 374 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 HSD17B12Q53GQ0 312 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 PRAMEF8Q5VWM4 474 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 PRAMEF7Q5VXH5 474 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 CTRB2Q6GPI1 263 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SLITRK4Q8IW52 837 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 ZBTB44Q8NCP5 570 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 OR2T4Q8NH00 348 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 PTP4A1Q93096 173 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 KISS1RQ969F8 398 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-203ENST00000374877 PMEPA1Q969W9 287 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 RAB7BQ96AH8 199 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 ARRDC3Q96B67 414 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 ELP4Q96EB1 424 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 FERD3LQ96RJ6 166 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 WDR26Q9H7D7 661 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 G3V3Q6 166 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 TRIM77I1YAP6 450 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 VEGFDO43915 354 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 GKN3PP0CG01 181 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-203ENST00000374877 UGT2B7P16662 529 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 BCL6P41182 706 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 FXYD6P3P58550 94 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 TAS2R43P59537 309 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 KLF9Q13886 244 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-203ENST00000374877 GPR68Q15743 365 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 TP53I3Q53FA7 332 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SLC25A25Q6KCM7 469 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 KIAA1324Q6UXG2 1013 aaKnown RBP10.26□□□□□ -0.77
CCDC40-203ENST00000374877 LGALS14Q8TCE9 139 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 CDS1Q92903 461 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 MOAP1Q96BY2 351 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SLC35A4Q96G79 324 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 RADILQ96JH8 1075 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 PGLYRP3Q96LB9 341 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 HS6ST2Q96MM7 605 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 LINC00052Q96N35 136 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SFXN2Q96NB2 322 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SEC22CQ9BRL7 303 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 SLC2A4RGQ9NR83 387 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 MGAT4CQ9UBM8 478 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 WDR45Q9Y484 360 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 NPFFR2Q9Y5X5 522 aa10.26□□□□□ -0.77
CCDC40-203ENST00000374877 IGKV1-8A0A0C4DH67 115 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 hCG_1807616A0A1W2PRN6 198 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ATP6V1G2-DDX39BF2Z307 99 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SBK2P0C263 348 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 ERGP11308 486 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 EPXP11678 715 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 HCCSP53701 268 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 RAG2P55895 527 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 PXKQ7Z7A4 578 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 OR13C2Q8NGS9 318 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 OR51A7Q8NH64 312 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 SMPDL3BQ92485 455 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 GABRG3Q99928 467 aa10.25□□□□□ -0.77
CCDC40-203ENST00000374877 C7orf50Q9BRJ6 194 aaKnown RBP10.25□□□□□ -0.77
CCDC40-203ENST00000374877 RSPH9Q9H1X1 276 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms