RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ZNF682O95780 498 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 IL11P20809 199 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 TACR3P29371 465 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 PTGER4P35408 488 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 MAP2K6P52564 334 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 SUCLG1P53597 346 aaKnown RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 CLDN15P56746 228 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 EIF2S3LQ2VIR3 472 aaKnown RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 GGNQ86UU5 652 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 CARM1Q86X55 608 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 ADGRG3Q86Y34 549 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 ULK2Q8IYT8 1036 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 MEIOBQ8N635 442 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 OR5M9Q8NGP3 310 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 PRR7Q8TB68 274 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 ZPLD1Q8TCW7 415 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 PHF10Q8WUB8 498 aaKnown RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 SLC25A43Q8WUT9 341 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 SMPDL3BQ92485 455 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 C3orf49Q96BT1 292 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 ASB9Q96DX5 294 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 MCHR1Q99705 422 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 CADM1Q9BY67 442 aaKnown RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 LRMDAQ9H2I8 198 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 C12orf10Q9HB07 376 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 CHRNA9Q9UGM1 479 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 TINAGQ9UJW2 476 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 CAMK2AQ9UQM7 478 aa13.53□□□□□ -0.24
HSPG2-201ENST00000374673 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-201ENST00000374673 TMED7-TICAM2A0A0A6YYA0 188 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 A0A0B4J2E0 115 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 TRGV8A0A0C4DH27 118 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 A0A1B0GWA3 101 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 A0A1B0GX12 115 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 GJE1A6NN92 205 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 H0Y3Z8 333 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 HOXD4P09016 255 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 TNFRSF1BP20333 461 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 FKBP2P26885 142 aaKnown RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 CLDN20P56880 219 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 MS4A2Q01362 244 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 KCNC4Q03721 635 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 SF3B4Q15427 424 aaKnown RBP eCLIP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 OR1Q1Q15612 314 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 CTU2Q2VPK5 515 aaKnown RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 IFI44LQ53G44 452 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 MTX3Q5HYI7 312 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 LCN8Q6JVE9 175 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF585AQ6P3V2 769 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF613Q6PF04 617 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 ESPNLQ6ZVH7 1005 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 VTCN1Q7Z7D3 282 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 ATG4DQ86TL0 474 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 RBM45Q8IUH3 476 aaKnown RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 UBQLNLQ8IYU4 475 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 LILRA2Q8N149 483 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 OR10Q1Q8NGQ4 319 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 DNAJA4Q8WW22 397 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 GEMIN6Q8WXD5 167 aaKnown RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 RELTQ969Z4 430 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 ADGRG7Q96K78 797 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 KLHL15Q96M94 604 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 PRR14Q9BWN1 585 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 POLR2J2Q9GZM3 115 aaKnown RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 MMADHCQ9H3L0 296 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-201ENST00000374673 TMEM185BQ9H7F4 350 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 RPS6KB2Q9UBS0 482 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 TMED7Q9Y3B3 224 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 KIAA1549Q9HCM3 1950 aa13.52□□□□□ -0.25
HSPG2-201ENST00000374673 POLEQ07864 2286 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 A0A1B0GUH1 482 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 TMEM72A0PK05 275 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 PYCARD-AS1I3L0S3 204 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ADAMDEC1O15204 470 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 SEC14L5O43304 696 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF208O43345 1280 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ATP6V1B2P21281 511 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ACVR2AP27037 513 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 SHC1P29353 583 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 OR1E2P47887 323 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 RPS3AP61247 264 aaKnown RBP13.51□□□□□ -0.25
HSPG2-201ENST00000374673 SRYQ05066 204 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 GABPB1Q06547 395 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-201ENST00000374673 TRAP1Q12931 704 aaKnown RBP13.51□□□□□ -0.25
HSPG2-201ENST00000374673 C4orf17Q53FE4 359 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 SYT14P1Q58G82 188 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ENTPD8Q5MY95 495 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 C1orf185Q5T7R7 199 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 C1QL3Q5VWW1 255 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 RTL6Q6ICC9 239 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ULK3Q6PHR2 472 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 POMZP3Q6PJE2 187 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 FKBP9P1Q75LS8 142 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ADGRE4PQ86SQ3 457 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 DHFR2Q86XF0 187 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 MCUR1Q96AQ8 359 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms