RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CABIN1Q9Y6J0 2220 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 TRAV27A0A087WT01 109 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 A0A0B4J2E0 115 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 IQCMA0A1B0GVH7 501 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 A0A1B0GX12 115 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 LILRA5A6NI73 299 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 RIIAD1A6NNX1 92 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 PRR23D1E9PI22 279 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 LRRTM2O43300 516 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 PTTG1O95997 202 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 IGHA1P01876 353 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 APOA1P02647 267 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 PRR23D2P0DMB1 279 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 SPINK2P20155 84 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 NOS3P29474 1203 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 SLC9A3P48764 834 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 CTBP2P56545 445 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 FOXK2Q01167 660 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 PLAURQ03405 335 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 CDC20Q12834 499 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 DEFB133Q30KQ1 61 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 DBX2Q6ZNG2 339 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 QSOX2Q6ZRP7 698 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 LAX1Q8IWV1 398 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 CADM3Q8N126 398 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 ACBD7Q8N6N7 88 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 RCBTB1Q8NDN9 531 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 SPRYD4Q8WW59 207 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 CCDC32Q9BV29 185 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 MEPEQ9NQ76 525 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 DNAJB12Q9NXW2 375 aaKnown RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 FLRT3Q9NZU0 649 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 ERVK-19Q9WJR5 959 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 SIGLEC7Q9Y286 467 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 DTX4Q9Y2E6 619 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 SF3B6Q9Y3B4 125 aaKnown RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 IGHV5-51A0A0C4DH38 117 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 PIAS2O75928 621 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 MSL3P1P0C860 447 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 GFERP55789 205 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 PSPHP78330 225 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 FABP5Q01469 135 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 TCTE1Q5JU00 501 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 NIPAL3Q6P499 406 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 THSD4Q6ZMP0 1018 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF550Q7Z398 422 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 KLBQ86Z14 1044 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 SIRT6Q8N6T7 355 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF485Q8NCK3 441 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 OR51Q1Q8NH59 317 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF578Q96N58 590 aaPredicted RBP11.13□□□□□ -0.63
HMGCL-202ENST00000374487 YIPF2Q9BWQ6 316 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 OR10A5Q9H207 317 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
HMGCL-202ENST00000374487 DAPL1A0PJW8 107 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ZC3H12DA2A288 527 aaKnown RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 RHPN2P1A8MT19 583 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 C12orf71A8MTZ7 269 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 CASKO14936 926 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 AQP9O43315 295 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF749O43361 778 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 RFPL3O75679 317 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 LALBAP00709 142 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 HLA-DPB1P04440 258 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 GUSBP08236 651 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 FGF9P31371 208 aaPredicted RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 RBM34P42696 430 aaKnown RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ACAA2P42765 397 aaKnown RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 GPR3P46089 330 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 PSMD4P55036 377 aaKnown RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 HSD17B7P56937 341 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 HNRNPKP61978 463 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 IGLV3-21P80748 117 aaPredicted RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ZSWIM7Q19AV6 140 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ULK3Q6PHR2 472 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF322Q6U7Q0 402 aaPredicted RBP11.12□□□□□ -0.63
HMGCL-202ENST00000374487 NPSR1Q6W5P4 371 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 RTL4Q6ZR62 310 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 LSMEM1Q8N8F7 131 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 SLC37A3Q8NCC5 494 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 C16orf52Q8NHV5 167 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 AP3S1Q92572 193 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ZDHHC12Q96GR4 267 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 TBX5Q99593 518 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 MED18Q9BUE0 208 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 HDHD5Q9BXW7 423 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 OR51V1Q9H2C8 321 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 ERVMER34-1Q9H9K5 563 aa11.12□□□□□ -0.63
HMGCL-202ENST00000374487 TRDV1A0A1B0GX56 115 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 A0A1W2PQL4 384 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SMIM30A4D0T7 59 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 TLCD2A6NGC4 264 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 GNB5O14775 395 aa11.11□□□□□ -0.63
HMGCL-202ENST00000374487 ADAM11O75078 769 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms