RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 GALNT18Q6P9A2 607 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 TMEM107Q6UX40 140 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 GOLGA7Q7Z5G4 137 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 C17orf78Q8N4C9 275 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 B4GALNT2Q8NHY0 566 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 KATNB1Q9BVA0 655 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 POPDC3Q9HBV1 291 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 Q9N2J8 555 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
HDAC8-204ENST00000373560 GAR1Q9NY12 217 aaKnown RBP10.48□□□□□ -0.73
HDAC8-204ENST00000373560 EGFL7Q9UHF1 273 aa10.48□□□□□ -0.73
HDAC8-204ENST00000373560 UPK1AO00322 258 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 CBFA2T2O43439 604 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 IL3P08700 152 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 CDH2P19022 906 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 ACHEP22303 614 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 SLC7A1P30825 629 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 GABRA3P34903 492 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 GP5P40197 560 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 SEC24CP53992 1094 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 PRPS1P60891 318 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 MVKQ03426 396 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 MAD2L1BPQ15013 274 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 TAF9Q16594 264 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 GLE1Q53GS7 698 aaKnown RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 TSPO2Q5TGU0 170 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 FAM9CQ8IZT9 166 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 L3MBTL4Q8NA19 623 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 C1orf162Q8NEQ5 155 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 BHLHE22Q8NFJ8 381 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 FBXO30Q8TB52 745 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 OR5B2Q96R09 309 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 DESI2Q9BSY9 194 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 LMF2Q9BU23 707 aaKnown RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 ZNF442Q9H7R0 627 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 C1RLQ9NZP8 487 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 SENP1Q9P0U3 644 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-204ENST00000373560 NOTCH3Q9UM47 2321 aa10.47□□□□□ -0.73
HDAC8-204ENST00000373560 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 GJE1A6NN92 205 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 NR5A2O00482 541 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 OR7A17O14581 309 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 COQ9O75208 318 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 IGHV2-5P01817 119 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 CRYAAP02489 173 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 PRKCAP17252 672 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 ELK3P41970 407 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 ALDH3B1P43353 468 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 SELENBP1Q13228 472 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 SGO1Q5FBB7 561 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 RUSC1-AS1Q66K80 236 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 STEAP4Q687X5 459 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 C16orf87Q6PH81 154 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 CASP12Q6UXS9 341 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 PAGE2Q7Z2X7 111 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 C1orf52Q8N6N3 182 aaKnown RBP10.46□□□□□ -0.73
HDAC8-204ENST00000373560 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 NUP37Q8NFH4 326 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 RDH5Q92781 318 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 KTI12Q96EK9 354 aaPredicted RBP10.46□□□□□ -0.73
HDAC8-204ENST00000373560 KCNS3Q9BQ31 491 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 QRSL1Q9H0R6 528 aaKnown RBP10.46□□□□□ -0.73
HDAC8-204ENST00000373560 BEX1Q9HBH7 125 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 EQTNQ9NQ60 294 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 MYEF2Q9P2K5 600 aaKnown RBP10.46□□□□□ -0.73
HDAC8-204ENST00000373560 DCTN4Q9UJW0 460 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 NUP50Q9UKX7 468 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 PSME2Q9UL46 239 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 SLC12A4Q9UP95 1085 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.73
HDAC8-204ENST00000373560 PCLOQ9Y6V0 5065 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 CCDC151A5D8V7 595 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 KIF2AO00139 706 aaPredicted RBP10.45□□□□□ -0.74
HDAC8-204ENST00000373560 ESRRBO95718 433 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 JUNP05412 331 aaKnown RBP10.45□□□□□ -0.74
HDAC8-204ENST00000373560 EIF1P41567 113 aaKnown RBP10.45□□□□□ -0.74
HDAC8-204ENST00000373560 ASMTP46597 345 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 ATP6V0D1P61421 351 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 LCN2P80188 198 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 HNRNPA0Q13151 305 aaKnown RBP10.45□□□□□ -0.74
HDAC8-204ENST00000373560 SLC29A2Q14542 456 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 ARMCX4Q5H9R4 360 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 SAXO2Q658L1 398 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 ANKRD16Q6P6B7 361 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 IKBIPQ70UQ0 350 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 REC114Q7Z4M0 266 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 ISCA2Q86U28 154 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 CCDC103Q8IW40 242 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 WDFY1Q8IWB7 410 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 TRPC4APQ8TEL6 797 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 OTUB1Q96FW1 271 aaPredicted RBP10.45□□□□□ -0.74
HDAC8-204ENST00000373560 UBXN10Q96LJ8 280 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 WWC2-AS2Q96NR7 200 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 MRPL37Q9BZE1 423 aaKnown RBP10.45□□□□□ -0.74
HDAC8-204ENST00000373560 RHOJQ9H4E5 214 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 IPPKQ9H8X2 491 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 TNFRSF19Q9NS68 423 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 PLEK2Q9NYT0 353 aa10.45□□□□□ -0.74
HDAC8-204ENST00000373560 EMC3Q9P0I2 261 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms