RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 C3orf49Q96BT1 292 aa22.91■■□□□ 1.26
CTSA-203ENST00000372459 IFT27Q9BW83 186 aa22.91■■□□□ 1.26
CTSA-203ENST00000372459 APMAPQ9HDC9 416 aa22.91■■□□□ 1.26
CTSA-203ENST00000372459 CHCHD3Q9NX63 227 aaKnown RBP22.91■■□□□ 1.26
CTSA-203ENST00000372459 H2AFY2Q9P0M6 372 aaPredicted RBP22.91■■□□□ 1.26
CTSA-203ENST00000372459 CARD8Q9Y2G2 431 aa22.91■■□□□ 1.26
CTSA-203ENST00000372459 CCRL2O00421 344 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 TSPAN2O60636 221 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 SLC2A10O95528 541 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 MYL12AP19105 171 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 PSMD7P51665 324 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 FOXL2P58012 376 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 PSPHP78330 225 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 TRA2AQ13595 282 aaKnown RBP eCLIP22.9■■□□□ 1.26
CTSA-203ENST00000372459 TSTQ16762 297 aaKnown RBP22.9■■□□□ 1.26
CTSA-203ENST00000372459 SLC43A2Q8N370 569 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 OR51A7Q8NH64 312 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 METTL21AQ8WXB1 218 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 FN3KQ9H479 309 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 ICAM5Q9UMF0 924 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 FAM86C2PA6NEL3 165 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 GNB5O14775 395 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 ALOX12BO75342 701 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 CCR4P51679 360 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 IL11RAQ14626 422 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 THSD4Q6ZMP0 1018 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 MINDY2Q8NBR6 621 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 OMA1Q96E52 524 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 ENKD1Q9H0I2 346 aa22.9■■□□□ 1.26
CTSA-203ENST00000372459 ASCC3Q8N3C0 2202 aaKnown RBP22.9■■□□□ 1.26
CTSA-203ENST00000372459 IGHV3-20A0A0C4DH32 117 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 NADKO95544 446 aaPredicted RBP22.89■■□□□ 1.26
CTSA-203ENST00000372459 SCG5P05408 212 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 SP9P0CG40 484 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 FGF5P12034 268 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 HTR1FP30939 366 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 RTL4Q6ZR62 310 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 CXXC5Q7LFL8 322 aaKnown RBP22.89■■□□□ 1.26
CTSA-203ENST00000372459 ZHX1-C8orf76Q96EF9 292 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 SGTBQ96EQ0 304 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 OPALINQ96PE5 141 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 MROQ9BYG7 248 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 HINT3Q9NQE9 182 aaKnown RBP22.89■■□□□ 1.26
CTSA-203ENST00000372459 BAIAP2Q9UQB8 552 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 MUC3AQ02505 3323 aa22.89■■□□□ 1.26
CTSA-203ENST00000372459 SAGE2PA6NJ88 616 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 VSTM2BA6NLU5 285 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 OIP5O43482 229 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 PPM1BO75688 479 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 ABCD3P28288 659 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 PNLIPRP2P54317 469 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 OXA1LQ15070 435 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 CBLN3Q6UW01 205 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 ADCK1Q86TW2 530 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 CPOQ8IVL8 374 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 GID4Q8IVV7 300 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 MFSD4AQ8N468 514 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 OR6Q1Q8NGQ2 317 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 FAM210AQ96ND0 272 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 SLC19A3Q9BZV2 496 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 SEMA4CQ9C0C4 833 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 LAT2Q9GZY6 243 aa22.89■■□□□ 1.25
CTSA-203ENST00000372459 EXOSC1Q9Y3B2 195 aaKnown RBP22.89■■□□□ 1.25
CTSA-203ENST00000372459 HEATR5AQ86XA9 2040 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 A0A1W2PQD3 144 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 PNMTP11086 282 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 EMP2P54851 167 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 FOXK2Q01167 660 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 TIMM50Q3ZCQ8 353 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 TNFRSF13CQ96RJ3 184 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 TAPBPLQ9BX59 468 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 SMOC1Q9H4F8 434 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 CMC2Q9NRP2 79 aa22.88■■□□□ 1.25
CTSA-203ENST00000372459 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.87■■□□□ 1.25
CTSA-203ENST00000372459 SLC6A6P31641 620 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 UGT2B10P36537 528 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 ETV5P41161 510 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 SLC6A8P48029 635 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 ETV1P50549 477 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 RNF4P78317 190 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 TRIM16LQ309B1 348 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 SLC35F1Q5T1Q4 408 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 DESI1Q6ICB0 168 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 C19orf48Q6RUI8 117 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 PAQR6Q6TCH4 344 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 BBS1Q8NFJ9 593 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 TP53INP1Q96A56 240 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 CTRCQ99895 268 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 MCCC2Q9HCC0 563 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 PCDHGA3Q9Y5H0 932 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 ELOA3DA6NLF2 546 aaPredicted RBP22.87■■□□□ 1.25
CTSA-203ENST00000372459 APOL3O95236 402 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 ENDOUP21128 410 aaKnown RBP22.87■■□□□ 1.25
CTSA-203ENST00000372459 SLC9A3P48764 834 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 TUBA1BP68363 451 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.87■■□□□ 1.25
CTSA-203ENST00000372459 ELOA3BQ3SY89 546 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 TUBA1AQ71U36 451 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 BTLAQ7Z6A9 289 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 AGBL5Q8NDL9 886 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms