RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 THUMPD1Q9NXG2 353 aaKnown RBP13.58□□□□□ -0.24
RPF1-202ENST00000370656 STOML1Q9UBI4 398 aa13.58□□□□□ -0.24
RPF1-202ENST00000370656 DKKL1Q9UK85 242 aa13.58□□□□□ -0.24
RPF1-202ENST00000370656 MRPS18CQ9Y3D5 142 aaKnown RBP13.58□□□□□ -0.24
RPF1-202ENST00000370656 A0A087WV62 115 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 A0A1W2PS29 197 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 SLC22A20A6NK97 555 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 CASQ2O14958 399 aaPredicted RBP13.57□□□□□ -0.24
RPF1-202ENST00000370656 EMC8O43402 210 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 HCRTR2O43614 444 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 TMCC2O75069 709 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 UGT2B11O75310 529 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 ERAL1O75616 437 aaKnown RBP13.57□□□□□ -0.24
RPF1-202ENST00000370656 PTGDSP41222 190 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 CLDN18P56856 261 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 COX20Q5RI15 118 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
RPF1-202ENST00000370656 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPF1-202ENST00000370656 FAM180BQ6P0A1 224 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 BHLHB9Q6PI77 547 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 CYP2R1Q6VVX0 501 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 SLC30A8Q8IWU4 369 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 MEIOBQ8N635 442 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 CANT1Q8WVQ1 401 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 ZC3HAV1LQ96H79 300 aaKnown RBP13.57□□□□□ -0.24
RPF1-202ENST00000370656 ITPAQ9BY32 194 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 PIF1Q9H611 641 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 PRODH2Q9UF12 536 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 DTX4Q9Y2E6 619 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 AP4S1Q9Y587 144 aa13.57□□□□□ -0.24
RPF1-202ENST00000370656 NBEAL1Q6ZS30 2694 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 RNF103-CHMP3A0A140T963 221 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 DHRS12A0PJE2 317 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 OR6C70A6NIJ9 312 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 PLOD3O60568 738 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 GMNNO75496 209 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 ARAFP10398 606 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 PAX1P15863 534 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 NCK1P16333 377 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 S1PR1P21453 382 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 DRD5P21918 477 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 CHI3L1P36222 383 aaPredicted RBP13.56□□□□□ -0.24
RPF1-202ENST00000370656 FEN1P39748 380 aaKnown RBP13.56□□□□□ -0.24
RPF1-202ENST00000370656 PPICP45877 212 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 MGAT2Q10469 447 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 MAP4K2Q12851 820 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 HSPB3Q12988 150 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 CYP51A1Q16850 503 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 AP1ARQ63HQ0 302 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 DESI1Q6ICB0 168 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 VWA1Q6PCB0 445 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 BTLAQ7Z6A9 289 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 RNF130Q86XS8 419 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 CLEC4FQ8N1N0 589 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 PQLC1Q8N2U9 271 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 HIPK4Q8NE63 616 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 ADCY4Q8NFM4 1077 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 OR56A1Q8NGH5 318 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 ZNF845Q96IR2 970 aaPredicted RBP13.56□□□□□ -0.24
RPF1-202ENST00000370656 RSRC1Q96IZ7 334 aaKnown RBP13.56□□□□□ -0.24
RPF1-202ENST00000370656 COL21A1Q96P44 957 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 OPN3Q9H1Y3 402 aaPredicted RBP13.56□□□□□ -0.24
RPF1-202ENST00000370656 A4GALTQ9NPC4 353 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 WIF1Q9Y5W5 379 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 USF3Q68DE3 2245 aa13.56□□□□□ -0.24
RPF1-202ENST00000370656 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 RNF212BA8MTL3 300 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 GSTA4O15217 222 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 GCM2O75603 506 aaPredicted RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 REM1O75628 298 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 IFNA2P01563 188 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 PEPDP12955 493 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 ETFAP13804 333 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 KDELR2P33947 212 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 KRT20P35900 424 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 PCBP3P57721 371 aaKnown RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 EXOSC7Q15024 291 aaKnown RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 ZNF628Q5EBL2 1059 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 GCNT6Q5T4J0 391 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 ZNF474Q6S9Z5 364 aaPredicted RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 ZNF550Q7Z398 422 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 LILRA2Q8N149 483 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 OR2L13Q8N349 312 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 GIMAP5Q96F15 307 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 MAGIXQ9H6Y5 334 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 C3orf14Q9HBI5 128 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 ZNF639Q9UID6 485 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 RIMS3Q9UJD0 308 aa13.55□□□□□ -0.24
RPF1-202ENST00000370656 FAF1Q9UNN5 650 aaPredicted RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 C19orf53Q9UNZ5 99 aaPredicted RBP13.55□□□□□ -0.24
RPF1-202ENST00000370656 FRG2CA6NGY1 282 aa13.54□□□□□ -0.24
RPF1-202ENST00000370656 HMGN4O00479 90 aa13.54□□□□□ -0.24
RPF1-202ENST00000370656 TO15178 435 aa13.54□□□□□ -0.24
RPF1-202ENST00000370656 TFPTP0C1Z6 253 aa13.54□□□□□ -0.24
RPF1-202ENST00000370656 CD8BP10966 210 aa13.54□□□□□ -0.24
RPF1-202ENST00000370656 PPP3CBP16298 524 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms