RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PCNX1Q96RV3 2341 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 CDRT15Q96T59 188 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 TM9SF2Q99805 663 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 TTYH2Q9BSA4 534 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 C1orf21Q9H246 121 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
SSR4-202ENST00000370085 ARHGAP21Q5T5U3 1957 aa12.41□□□□□ -0.42
SSR4-202ENST00000370085 RELNP78509 3460 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 CLCA1A8K7I4 914 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 HSPB2A8KAH6 182 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 SEMA7AO75326 666 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 STAMBPO95630 424 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 LGI1O95970 557 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 TFPIP10646 304 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 HTR1EP28566 365 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 IFNA8P32881 189 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 TIMP3P35625 211 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
SSR4-202ENST00000370085 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
SSR4-202ENST00000370085 RASSF2P50749 326 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 CLDN15P56746 228 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 CARD18P57730 90 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 HSPB2Q16082 182 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 TMEM176BQ3YBM2 270 aaPredicted RBP12.4□□□□□ -0.42
SSR4-202ENST00000370085 RIPPLY2Q5TAB7 128 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 EEF1A1P5Q5VTE0 462 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 HBMQ6B0K9 141 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 GTF2IRD2BQ6EKJ0 949 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 OR2A2Q6IF42 318 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 XKRXQ6PP77 449 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 GTF2IRD2Q86UP8 949 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 DNAJA4Q8WW22 397 aaPredicted RBP12.4□□□□□ -0.42
SSR4-202ENST00000370085 ASB5Q8WWX0 329 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 WNT2BQ93097 391 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 TAMM41Q96BW9 452 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 ZHX1-C8orf76Q96EF9 292 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 CCDC120Q96HB5 630 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 UCN2Q96RP3 112 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 DMRTA2Q96SC8 542 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 TUBA1CQ9BQE3 449 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 CTPS2Q9NRF8 586 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 MAGEL2Q9UJ55 1249 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 RPS6KA6Q9UK32 745 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 ZNF175Q9Y473 711 aa12.4□□□□□ -0.42
SSR4-202ENST00000370085 USP9XQ93008 2570 aaPredicted RBP12.4□□□□□ -0.42
SSR4-202ENST00000370085 TMED7-TICAM2A0A0A6YYA0 188 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 SLC22A20A6NK97 555 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 TNFSF11O14788 317 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 ZNF208O43345 1280 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 TPST1O60507 370 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 FMO6PO60774 539 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 ATP5HO75947 161 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 FESP07332 822 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 PNMTP11086 282 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 HSD17B1P14061 328 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 AGAP20933 346 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 TACR3P29371 465 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 CLDN20P56880 219 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
SSR4-202ENST00000370085 PLAURQ03405 335 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 NRF1Q16656 503 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 DUSP7Q16829 419 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 CYBRD1Q53TN4 286 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 SYT14P1Q58G82 188 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 ULK3Q6PHR2 472 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 GGNQ86UU5 652 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 ZNF808Q8N4W9 903 aaPredicted RBP12.39□□□□□ -0.43
SSR4-202ENST00000370085 LSMEM1Q8N8F7 131 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
SSR4-202ENST00000370085 OR10D3Q8NH80 312 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 CPNE4Q96A23 557 aaPredicted RBP12.39□□□□□ -0.43
SSR4-202ENST00000370085 TPD52L3Q96J77 140 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 OR5B2Q96R09 309 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 KLHDC3Q9BQ90 382 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 ADAM19Q9H013 955 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 C12orf10Q9HB07 376 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 PRPF19Q9UMS4 504 aaKnown RBP12.39□□□□□ -0.43
SSR4-202ENST00000370085 USP22Q9UPT9 525 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 TMED7Q9Y3B3 224 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 HDGFL3Q9Y3E1 203 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 CHST2Q9Y4C5 530 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 FAM215AQ9Y5M1 114 aa12.39□□□□□ -0.43
SSR4-202ENST00000370085 SPTBN1Q01082 2364 aaKnown RBP12.38□□□□□ -0.43
SSR4-202ENST00000370085 MBD3L4A6NDZ8 208 aaPredicted RBP12.38□□□□□ -0.43
SSR4-202ENST00000370085 MBD3L3A6NE82 208 aaPredicted RBP12.38□□□□□ -0.43
SSR4-202ENST00000370085 MBD3L5A6NJ08 208 aaPredicted RBP12.38□□□□□ -0.43
SSR4-202ENST00000370085 ELOA3DA6NLF2 546 aaPredicted RBP12.38□□□□□ -0.43
SSR4-202ENST00000370085 FRS3O43559 492 aa12.38□□□□□ -0.43
SSR4-202ENST00000370085 ZG16O60844 167 aa12.38□□□□□ -0.43
SSR4-202ENST00000370085 GCM2O75603 506 aaPredicted RBP12.38□□□□□ -0.43
SSR4-202ENST00000370085 UBOX5O94941 541 aa12.38□□□□□ -0.43
SSR4-202ENST00000370085 ZNF682O95780 498 aa12.38□□□□□ -0.43
SSR4-202ENST00000370085 LDLRP01130 860 aa12.38□□□□□ -0.43
SSR4-202ENST00000370085 GLI4P10075 376 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms