RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 MAD2L1BPQ15013 274 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-204ENST00000368694 COL28A1Q2UY09 1125 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 ZNF791Q3KP31 576 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-204ENST00000368694 KCTD21Q4G0X4 260 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 RASSF6Q6ZTQ3 369 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 KIF18BQ86Y91 864 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 DEPDC4Q8N2C3 294 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 TMEM156Q8N614 296 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 SIRT6Q8N6T7 355 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 TSPAN14Q8NG11 270 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 HDAC2Q92769 488 aaKnown RBP17.73■□□□□ 0.43
CHTOP-204ENST00000368694 RNF6Q9Y252 685 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 KLF4O43474 513 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 PNMTP11086 282 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 MAKP20794 623 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 MST1P26927 711 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 SLC1A3P43003 542 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 NR1H2P55055 460 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 MLF1P58340 268 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 CRYZQ08257 329 aaKnown RBP17.73■□□□□ 0.43
CHTOP-204ENST00000368694 TGIF1Q15583 401 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 TOMM34Q15785 309 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-204ENST00000368694 RBM48Q5RL73 367 aaKnown RBP17.73■□□□□ 0.43
CHTOP-204ENST00000368694 LINC00114Q6XXX2 140 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 IQCF1Q8N6M8 205 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 PLA2G12AQ9BZM1 189 aa17.73■□□□□ 0.43
CHTOP-204ENST00000368694 M0R129 80 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 ADAM10O14672 748 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 SERPINA7P05543 415 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 EEF1B2P24534 225 aaKnown RBP17.72■□□□□ 0.43
CHTOP-204ENST00000368694 FMO3P31513 532 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 CASP12Q6UXS9 341 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 DTX1Q86Y01 620 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 BPIFB6Q8NFQ5 453 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 FBLIM1Q8WUP2 373 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 ZNF524Q96C55 264 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 YTHDF1Q9BYJ9 559 aaKnown RBP17.72■□□□□ 0.43
CHTOP-204ENST00000368694 PPP4R1LQ9P1A2 415 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 EML6Q6ZMW3 1958 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 MPDZO75970 2070 aa17.72■□□□□ 0.43
CHTOP-204ENST00000368694 CDC40O60508 579 aaKnown RBP eCLIP17.71■□□□□ 0.43
CHTOP-204ENST00000368694 FUT1P19526 365 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 TACR3P29371 465 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 CDH15P55291 814 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 CTBP2P56545 445 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 CHAF1BQ13112 559 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 POMZP3Q6PJE2 187 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 ZNF620Q6ZNG0 422 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 ATG4DQ86TL0 474 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-204ENST00000368694 BRIX1Q8TDN6 353 aaKnown RBP17.71■□□□□ 0.43
CHTOP-204ENST00000368694 TBC1D23Q9NUY8 699 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 CHCHD3Q9NX63 227 aaKnown RBP17.71■□□□□ 0.43
CHTOP-204ENST00000368694 BLOC1S6Q9UL45 172 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 WIF1Q9Y5W5 379 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 UNC119BA6NIH7 251 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 SLC1A7O00341 560 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 DLL1O00548 723 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 GP1BBP13224 206 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 GAS1P54826 345 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 QPRTQ15274 297 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 CLEC12AQ5QGZ9 265 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 SLX4IPQ5VYV7 408 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 LAIR2Q6ISS4 152 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 ADAMTS17Q8TE56 1095 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 RNF138Q8WVD3 245 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 THOC3Q96J01 351 aaKnown RBP17.71■□□□□ 0.43
CHTOP-204ENST00000368694 SDHAF3Q9NRP4 125 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 HPF1Q9NWY4 346 aa17.71■□□□□ 0.43
CHTOP-204ENST00000368694 CHCHD2Q9Y6H1 151 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-204ENST00000368694 EFCAB9A8MZ26 197 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 GFRA3O60609 400 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 CRHBPP24387 322 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 CASP3P42574 277 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 SMSP52788 366 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 GINS1Q14691 196 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 PRAMEF20Q5VT98 475 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 BROXQ5VW32 411 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 B3GNTL1Q67FW5 361 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-204ENST00000368694 SLC27A4Q6P1M0 643 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 PTCHD4Q6ZW05 846 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 TMPRSS11FQ6ZWK6 438 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 OR8D4Q8NGM9 314 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 FANK1Q8TC84 345 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 GPR119Q8TDV5 335 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 OSTF1Q92882 214 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 CCNL2Q96S94 520 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-204ENST00000368694 TAS2R10Q9NYW0 307 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 MED11Q9P086 117 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 IL20RAQ9UHF4 553 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 XPNPEP2O43895 674 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 PFDN1O60925 122 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 LIPCP11150 499 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 CCNA2P20248 432 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 GIPRP48546 466 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 TOP3AQ13472 1001 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-204ENST00000368694 SMN1Q16637 294 aaKnown RBP17.7■□□□□ 0.42
CHTOP-204ENST00000368694 IGF2-ASQ6U949 168 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 DND1Q8IYX4 353 aaKnown RBP17.7■□□□□ 0.42
CHTOP-204ENST00000368694 ARMC10Q8N2F6 343 aa17.7■□□□□ 0.42
CHTOP-204ENST00000368694 OR13C2Q8NGS9 318 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms