RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TRAF4Q9BUZ4 470 aaPredicted RBP14.16□□□□□ -0.14
CKS1B-202ENST00000368436 REG4Q9BYZ8 158 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 SLCO5A1Q9H2Y9 848 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 OR51I1Q9H343 314 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 EXD2Q9NVH0 621 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 CISD1Q9NZ45 108 aaKnown RBP14.16□□□□□ -0.14
CKS1B-202ENST00000368436 A0A1W2PP18 115 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 SHISA9B4DS77 424 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 SULT2B1O00204 365 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 KIAA0513O60268 411 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 RAMP1O60894 148 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 AGR2O95994 175 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 UBTFL6P0CB48 400 aaPredicted RBP14.15□□□□□ -0.14
CKS1B-202ENST00000368436 APOBEC1P41238 236 aaKnown RBP14.15□□□□□ -0.14
CKS1B-202ENST00000368436 CSNK2A1P68400 391 aaPredicted RBP14.15□□□□□ -0.14
CKS1B-202ENST00000368436 PHC1P78364 1004 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 IFFO1Q0D2I5 559 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 SYT14P1Q58G82 188 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 ABLIM2Q6H8Q1 611 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 TYW3Q6IPR3 259 aaKnown RBP14.15□□□□□ -0.14
CKS1B-202ENST00000368436 C16orf62Q7Z3J2 963 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 GALNT5Q7Z7M9 940 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 MTDHQ86UE4 582 aaKnown RBP14.15□□□□□ -0.14
CKS1B-202ENST00000368436 DTX2Q86UW9 622 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 NUDCD3Q8IVD9 361 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 MUCL1Q96DR8 90 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 CCDC106Q9BWC9 280 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 SAP130Q9H0E3 1048 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 AKTIPQ9H8T0 292 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 POLE3Q9NRF9 147 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 NPAP1Q9NZP6 1156 aa14.15□□□□□ -0.14
CKS1B-202ENST00000368436 ANK3Q12955 4377 aaKnown RBP14.15□□□□□ -0.14
CKS1B-202ENST00000368436 PRSS51A0A1B0GVH4 220 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 OR5H1A6NKK0 313 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ZNF716A6NP11 495 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ITM2AO43736 263 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 IGHV4-39P01824 125 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 OR12D1P0DN82 309 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 GGT1P19440 569 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 UQCRC2P22695 453 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ACVR1BP36896 505 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 VSNL1P62760 191 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 DMTNQ08495 405 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 STK11Q15831 433 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ZNF100Q8IYN0 542 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ZNF433Q8N7K0 673 aaPredicted RBP14.14□□□□□ -0.15
CKS1B-202ENST00000368436 MAPK1IP1LQ8NDC0 245 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 OR4A15Q8NGL6 344 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 TMEM109Q9BVC6 243 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 CTPS2Q9NRF8 586 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 PCDHGB4Q9UN71 923 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 SLC35A3Q9Y2D2 325 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 WDR45Q9Y484 360 aa14.14□□□□□ -0.15
CKS1B-202ENST00000368436 ANKRD28O15084 1053 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 NDUFS7O75251 213 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 BCAS1O75363 584 aaPredicted RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 PMS2P2O95744 297 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 FKBP2P26885 142 aaKnown RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 NTF4P34130 210 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 CASP9P55211 416 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 FUT5Q11128 374 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 FAPQ12884 760 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 PDCD2Q16342 344 aaPredicted RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 ATAD3BQ5T9A4 648 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 ANXA8L1Q5VT79 327 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 FBXW9Q5XUX1 488 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 SAXO2Q658L1 398 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 FRRS1Q6ZNA5 592 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 GRINAQ7Z429 371 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 ZNF781Q8N8C0 355 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 AENQ8WTP8 325 aaKnown RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 XAGE5Q8WWM1 108 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 RAB8BQ92930 207 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 TESCQ96BS2 214 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 ROPN1LQ96C74 230 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 ZG16BQ96DA0 208 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 RADILQ96JH8 1075 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 DPY30Q9C005 99 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 C20orf27Q9GZN8 174 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 EXOSC3Q9NQT5 275 aaKnown RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 FAIMQ9NVQ4 179 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 EMC3Q9P0I2 261 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 HDGFL3Q9Y3E1 203 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 SPIN1Q9Y657 262 aaPredicted RBP14.13□□□□□ -0.15
CKS1B-202ENST00000368436 RTTNQ86VV8 2226 aa14.13□□□□□ -0.15
CKS1B-202ENST00000368436 ABCA1O95477 2261 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 PRAMEF27A3QJZ7 478 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ABCD4O14678 606 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 DNPH1O43598 174 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 CPSF4O95639 269 aaKnown RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 SERPINE1P05121 402 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 MYZAPP0CAP1 466 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 CLK1P49759 484 aaKnown RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 SLC16A1P53985 500 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ABCE1P61221 599 aaKnown RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 PLAURQ03405 335 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 CASP8Q14790 479 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 TNFAIP8L2Q6P589 184 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms