RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 MTDHQ86UE4 582 aaKnown RBP20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 COMTD1Q86VU5 262 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 ADGRG3Q86Y34 549 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 POU5F2Q8N7G0 328 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 SFXN3Q9BWM7 321 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 SRXN1Q9BYN0 137 aa20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 PAQR5Q9NXK6 330 aaPredicted RBP20.1■□□□□ 0.81
ECHDC1-203ENST00000368291 HNRNPRO43390 633 aaKnown RBP20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 CCDC22O60826 627 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 GCM2O75603 506 aaPredicted RBP20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 NPPAP01160 153 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 PRG2P13727 222 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 SLC6A2P23975 617 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 APOBEC1P41238 236 aaKnown RBP20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 PCBP3P57721 371 aaKnown RBP20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 CARD18P57730 90 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 FBXL19-AS1Q494R0 122 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 RABL3Q5HYI8 236 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 OR2A2Q6IF42 318 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 TREML1Q86YW5 311 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 ZZZ3Q8IYH5 903 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 ZNF440Q8IYI8 595 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 HIPK4Q8NE63 616 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 OR10A6Q8NH74 314 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 SPOCK3Q9BQ16 436 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 MYLK2Q9H1R3 596 aa20.09■□□□□ 0.81
ECHDC1-203ENST00000368291 A0A1W2PNR3 127 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 GJE1A6NN92 205 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 SYT5O00445 386 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 TPST1O60507 370 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 CRHP06850 196 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 KIR2DL2P43627 348 aaPredicted RBP20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 ASCL1P50553 236 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 RBBP4Q09028 425 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 ZNF239Q16600 458 aaKnown RBP20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 CYP51A1Q16850 503 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 ZSWIM7Q19AV6 140 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 PDSS1Q5T2R2 415 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 VWA1Q6PCB0 445 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 SERPINA11Q86U17 422 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 C11orf65Q8NCR3 313 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 RP9Q8TA86 221 aaKnown RBP20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 MARVELD3Q96A59 401 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 ADAM19Q9H013 955 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 NSRP1Q9H0G5 558 aaKnown RBP20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 OSGIN1Q9UJX0 560 aa20.08■□□□□ 0.81
ECHDC1-203ENST00000368291 FRS3O43559 492 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 COX4I1P13073 169 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 AQP1P29972 269 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 PRKAR1BP31321 381 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 SLC1A3P43003 542 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 GLIPR1L2Q4G1C9 344 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 DHRS4L2Q6PKH6 230 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 CPLX4Q7Z7G2 160 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 CALHM3Q86XJ0 350 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 OR8J3Q8NGG0 315 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 ROBO4Q8WZ75 1007 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 RCN3Q96D15 328 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 STARD4Q96DR4 205 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 SERINC1Q9NRX5 453 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 FAM53CQ9NYF3 392 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 CHRNA9Q9UGM1 479 aa20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 MCTS1Q9ULC4 181 aaKnown RBP20.08■□□□□ 0.8
ECHDC1-203ENST00000368291 CENPEQ02224 2701 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 FREM1Q5H8C1 2179 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 MFN2O95140 757 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 FCGR2AP12318 317 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 COX6B1P14854 86 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 TACR3P29371 465 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 SYT14P1Q58G82 188 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 PPP4R4Q6NUP7 873 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 MEX3BQ6ZN04 569 aaKnown RBP20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 ZNF550Q7Z398 422 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 BTLAQ7Z6A9 289 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 DMRTC2Q8IXT2 367 aaPredicted RBP20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 PCYOX1LQ8NBM8 494 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 CPNE4Q96A23 557 aaPredicted RBP20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 OR5B2Q96R09 309 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 PRRG4Q9BZD6 226 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 PIF1Q9H611 641 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 CACYBPQ9HB71 228 aaKnown RBP20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 ANGPT4Q9Y264 503 aa20.07■□□□□ 0.8
ECHDC1-203ENST00000368291 TMED7-TICAM2A0A0A6YYA0 188 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 EEF1E1-BLOC1S5C9J1V9 151 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 EEF1E1O43324 174 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 SYNGR4O95473 234 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 PRF1P14222 555 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 SLC7A1P30825 629 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 HTR3AP46098 478 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 POLR2HP52434 150 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 RAC3P60763 192 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 DMTNQ08495 405 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 PIGWQ7Z7B1 504 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 KRT73Q86Y46 540 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 ZNF295-AS1Q8N0V1 137 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 RNF128Q8TEB7 428 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 SLC25A43Q8WUT9 341 aaPredicted RBP20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 RNASE6Q93091 150 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 SLC35B4Q969S0 331 aa20.06■□□□□ 0.8
ECHDC1-203ENST00000368291 ARL5BQ96KC2 179 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms