RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 CPN1P15169 458 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 IL7RP16871 459 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 COILP38432 576 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 AMTP48728 403 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 WASHC5Q12768 1159 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ASPHQ12797 758 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PIGHQ14442 188 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ITIH4Q14624 930 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 MMEL1Q495T6 779 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 FAM205BPQ63HN1 556 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ITPRIPL1Q6GPH6 555 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 SBSNQ6UWP8 590 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PACS1Q6VY07 963 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PID1Q7Z2X4 250 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 YRDCQ86U90 279 aaKnown RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 GRAMD2AQ8IUY3 354 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 CAMKVQ8NCB2 501 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 KBTBD8Q8NFY9 601 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 B4GALNT2Q8NHY0 566 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 SLC13A3Q8WWT9 602 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ATL1Q8WXF7 558 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 TM4SF19Q96DZ7 209 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 TMEM68Q96MH6 324 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 OLFM3Q96PB7 478 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 RNF157Q96PX1 679 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 DOHHQ9BU89 302 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 UBQLN3Q9H347 655 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 SPATA7Q9P0W8 599 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 HOOK1Q9UJC3 728 aaKnown RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 SLC22A7Q9Y694 548 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 HSPA12AO43301 675 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 LCMT2O60294 686 aaKnown RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 TRIM3O75382 744 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 NKX2-2O95096 273 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PRB2P02812 416 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF182P17025 639 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 RPL3P39023 403 aaKnown RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 STARP49675 285 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PDK2Q15119 407 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 RAB35Q15286 201 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 TPD52L1Q16890 204 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ASPGQ86U10 573 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF567Q8N184 647 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF740Q8NDX6 193 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 OR10G3Q8NGC4 313 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 RAPGEF5Q92565 580 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 CDKN2AIPNLQ96HQ2 116 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 ZNF597Q96LX8 424 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 SYT11Q9BT88 431 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 MRPL47Q9HD33 250 aaKnown RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 KLHL8Q9P2G9 620 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PAM16Q9Y3D7 125 aa6.25□□□□□ -1.41
H3F3A-201ENST00000366813 CHCHD2Q9Y6H1 151 aaPredicted RBP6.25□□□□□ -1.41
H3F3A-201ENST00000366813 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 PRSS47A8MTI9 375 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 H7C0S8 307 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 PSMD12O00232 456 aaPredicted RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 HNRNPCL1O60812 293 aaKnown RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 RAMP1O60894 148 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 AVILO75366 819 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 ACTL6AO96019 429 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 ERGP11308 486 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 PTMSP20962 102 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 ADRA1AP35348 466 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 PPARGP37231 505 aaPredicted RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 CLNS1AP54105 237 aaKnown RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 TAS2R40P59535 323 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 RPS15AP62244 130 aaKnown RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 HERC3Q15034 1050 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 HADHQ16836 314 aaKnown RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 PIGGQ5H8A4 983 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 NCMAPQ5T1S8 102 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 CAPN13Q6MZZ7 669 aaPredicted RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 STAC2Q6ZMT1 411 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 P4HA3Q7Z4N8 544 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 MAP7D3Q8IWC1 876 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 NIPA2Q8N8Q9 360 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 TC2NQ8N9U0 490 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 OR9A1PQ8NGU1 263 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 EBNA1BP2Q99848 306 aaKnown RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 OR8D2Q9GZM6 311 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 ACTR6Q9GZN1 396 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 GHITMQ9H3K2 345 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 NLE1Q9NVX2 485 aaPredicted RBP6.24□□□□□ -1.41
H3F3A-201ENST00000366813 TAB2Q9NYJ8 693 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 CNIH4Q9P003 139 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 MYO6Q9UM54 1294 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 C15orf41Q9Y2V0 281 aa6.24□□□□□ -1.41
H3F3A-201ENST00000366813 LRP5LA4QPB2 252 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 GOLGA6L4A6NEF3 574 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 GOLGA6L9A6NEM1 432 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
H3F3A-201ENST00000366813 PLOD2O00469 737 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 AP3D1O14617 1153 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 CRHP06850 196 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 NGFRP08138 427 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 RNH1P13489 461 aaKnown RBP6.23□□□□□ -1.41
H3F3A-201ENST00000366813 ALOX12P18054 663 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 KDELR1P24390 212 aa6.23□□□□□ -1.41
H3F3A-201ENST00000366813 HNRNPH1P31943 449 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms