RNA–Protein interactions for RNA: ENST00000366696.1

HIST3H3-201, Transcript of histone cluster 3 H3, humanhuman

APPRIS P1 BASIC

Gene HIST3H3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3-201ENST00000366696 SAP130Q9H0E3 1048 aa13.16□□□□□ -0.3
HIST3H3-201ENST00000366696 CTPS2Q9NRF8 586 aa13.16□□□□□ -0.3
HIST3H3-201ENST00000366696 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
HIST3H3-201ENST00000366696 HIVEP1P15822 2718 aa13.16□□□□□ -0.3
HIST3H3-201ENST00000366696 TMEM247A6NEH6 219 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 HMGN4O00479 90 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 KLF4O43474 513 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 CYTIPO60759 359 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 SLC22A3O75751 556 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 IL6P05231 212 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 FESP07332 822 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 IDO1P14902 403 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 CCNA2P20248 432 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 IDH2P48735 452 aaKnown RBP13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 ITGADQ13349 1161 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 P2RY6Q15077 328 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 TSC22D1Q15714 1073 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 STK11Q15831 433 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 SYPL1Q16563 259 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 LRRC74BQ6ZQY2 392 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 BHLHA15Q7RTS1 189 aaPredicted RBP13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 BIVMQ86UB2 503 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 PEX5LQ8IYB4 626 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 WDR60Q8WVS4 1066 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 TEX37Q96LM6 180 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 PSD2Q9BQI7 771 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 INPP5KQ9BT40 448 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 GSX1Q9H4S2 264 aaPredicted RBP13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 ESRP2Q9H6T0 727 aaKnown RBP13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 RMND5AQ9H871 391 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 MTHFD2LQ9H903 347 aaPredicted RBP13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 BCO1Q9HAY6 547 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 CHRNA9Q9UGM1 479 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 GPR45Q9Y5Y3 372 aa13.15□□□□□ -0.3
HIST3H3-201ENST00000366696 ETV2O00321 342 aaPredicted RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 SMAD9O15198 467 aaKnown RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 CLOCKO15516 846 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 DNAJA2O60884 412 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 SNNO75324 88 aaPredicted RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 CD3EP07766 207 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 INHBBP09529 407 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 IL12AP29459 219 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 HTR3AP46098 478 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 OR3A2P47893 321 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 SLC18A1P54219 525 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 OR2B6P58173 313 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 FUT5Q11128 374 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 GSTA3Q16772 222 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 PDCD4Q53EL6 469 aaKnown RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 YTHDF3Q7Z739 585 aaKnown RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 MTDHQ86UE4 582 aaKnown RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 GABRG1Q8N1C3 465 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 ANKFN1Q8N957 763 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 ZG16BQ96DA0 208 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 MUCL1Q96DR8 90 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 MARK4Q96L34 752 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 BDH2Q9BUT1 245 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 CXorf56Q9H5V9 222 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 TMBIM4Q9HC24 238 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 CALML5Q9NZT1 146 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 HDGFL3Q9Y3E1 203 aa13.14□□□□□ -0.31
HIST3H3-201ENST00000366696 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 ZNF724A8MTY0 619 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 FAM171A2A8MVW0 826 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 HS3ST1O14792 307 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 UBDO15205 165 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 PLAUP00749 431 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 NID1P14543 1247 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 LOXP28300 417 aaPredicted RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 CDKN2CP42773 168 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 CRATP43155 626 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 CLK1P49759 484 aaKnown RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 PRSS57Q6UWY2 283 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 DNAJC14Q6Y2X3 702 aaPredicted RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 Q6ZT83 130 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 FAM71CQ8NEG0 241 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 PIGXQ8TBF5 258 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 PIWIL2Q8TC59 973 aaKnown RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 CNOT9Q92600 299 aaKnown RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 PMM1Q92871 262 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 DDIT4LQ96D03 193 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 ITCHQ96J02 903 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 Q96MF0 132 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 CCDC106Q9BWC9 280 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 POTEKPQ9BYX7 375 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
HIST3H3-201ENST00000366696 P2RX2Q9UBL9 471 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms