RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 AGAP5A6NIR3 686 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CYP7B1O75881 506 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CHRM4P08173 479 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 RPS4Y1P22090 263 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 EDNRAP25101 427 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC7A1P30825 629 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CHI3L1P36222 383 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DIO1P49895 249 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MERTKQ12866 999 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC9B1Q4ZJI4 515 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PDCD4Q53EL6 469 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SYT14P1Q58G82 188 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 COX20Q5RI15 118 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SHEQ5VZ18 495 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SEZ6L2Q6UXD5 910 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ADGRG3Q86Y34 549 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ANKFN1Q8N957 763 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 STEAP2Q8NFT2 490 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MGARPQ8TDB4 240 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC25A43Q8WUT9 341 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PMM1Q92871 262 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OR5B2Q96R09 309 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GSX1Q9H4S2 264 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MANSC1Q9H8J5 431 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CTPS2Q9NRF8 586 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SERINC1Q9NRX5 453 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KLHL9Q9P2J3 617 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 LIPT1Q9Y234 373 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ROS1P08922 2347 aa12.13□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PLAUP00749 431 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ADAP00813 363 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IL6P05231 212 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GSNP06396 782 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZCCHC18P0CG32 403 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KITP10721 976 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IDO1P14902 403 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PAX1P15863 534 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MAGEA8P43361 318 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OR3A2P47893 321 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NR1H2P55055 460 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 RASGEF1BQ0VAM2 473 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 P2RY6Q15077 328 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PDK3Q15120 406 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KRTAP21-3Q3LHN1 58 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GPAT3Q53EU6 434 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PRSS57Q6UWY2 283 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF621Q6ZSS3 439 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 Q6ZT83 130 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GRINAQ7Z429 371 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 LILRB1Q8NHL6 650 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CNOT9Q92600 299 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ARL8AQ96BM9 186 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 S100PBPQ96BU1 408 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ARL5BQ96KC2 179 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MTHFD2LQ9H903 347 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 UBTD1Q9HAC8 227 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DSPPQ9NZW4 1301 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DSCAMO60469 2012 aa12.12□□□□□ -0.47
TNFRSF1A-202ENST00000366159 UQCRHLA0A096LP55 91 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF716A6NP11 495 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 FAAHO00519 579 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC22A3O75751 556 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PMS2P2O95744 297 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NTF4P34130 210 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 H3F3AP84243 136 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ITGADQ13349 1161 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GSTA3Q16772 222 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF704Q6ZNC4 412 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MTDHQ86UE4 582 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PIWIL2Q8TC59 973 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 POM121Q96HA1 1249 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OR52B2Q96RD2 323 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CCL19Q99731 98 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZIM2Q9NZV7 527 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SULT2B1O00204 365 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 AP3D1O14617 1153 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DNPH1O43598 174 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SMPD2O60906 423 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms