RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TM9SF3Q9HD45 589 aa0.25□□□□□ -2.37
RNU6-238P-201ENST00000363313 MDN1Q9NU22 5596 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZMYM6O95789 1325 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 ARID4BQ4LE39 1312 aaPredicted RBP0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 K7EM74 188 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 CACNB4O00305 520 aaPredicted RBP0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 PAX3P23760 479 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 TGFBR2P37173 567 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 RAD52P43351 418 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 SELENOTP62341 195 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 EWSR1Q01844 656 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 SRYQ05066 204 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF763Q0D2J5 394 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 NME3Q13232 169 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 GRB7Q14451 532 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 ARL6IP1Q15041 203 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 LRIT3Q3SXY7 679 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 LYPD2Q6UXB3 125 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 B3GLCTQ6Y288 498 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 P4HA3Q7Z4N8 544 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 NAT8LQ8N9F0 302 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 OR4A16Q8NH70 328 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 RTN4IP1Q8WWV3 396 aaPredicted RBP0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 TSG101Q99816 390 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 COMMD4Q9H0A8 199 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 ANKEF1Q9NU02 776 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 SMPD3Q9NY59 655 aaPredicted RBP0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 WRAP73Q9P2S5 460 aaPredicted RBP0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 CRLS1Q9UJA2 301 aa0.24□□□□□ -2.37
RNU6-238P-201ENST00000363313 IGHV5-51A0A0C4DH38 117 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 IGHV3-66A0A0C4DH42 116 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 TTC26A0AVF1 554 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 ALOX15BO15296 676 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 CD5LO43866 347 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 PDHBP11177 359 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 POU2F1P14859 743 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 GZMMP51124 257 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 TGFBR3Q03167 851 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 RFX4Q33E94 735 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 LRRC10Q5BKY1 277 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 FAM92BQ6ZTR7 304 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 TOM1L2Q6ZVM7 507 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 PAQR9Q6ZVX9 377 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 WDR86Q86TI4 376 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 YRDCQ86U90 279 aaKnown RBP0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 SVOPLQ8N434 492 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 CCDC191Q8NCU4 936 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 OR10G3Q8NGC4 313 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 OR1P1Q8NH06 330 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 CD300LFQ8TDQ1 290 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 ADIPOR1Q96A54 375 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 TM4SF19Q96DZ7 209 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 FCRL1Q96LA6 429 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 CCL28Q9NRJ3 127 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 SEPT10Q9P0V9 454 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 MAD2L2Q9UI95 211 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 TTLL3Q9Y4R7 772 aa0.23□□□□□ -2.37
RNU6-238P-201ENST00000363313 SF3B1O75533 1304 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 MN1Q10571 1320 aaPredicted RBP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 PP2D1A8MPX8 630 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 H3BMH7 237 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 H3BTX0 84 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 PEX7O00628 323 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 SYNGR4O95473 234 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 IFNAR1P17181 557 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 VCLP18206 1134 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 SERPINB6P35237 376 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 SERPINH1P50454 418 aaKnown RBP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 SNU13P55769 128 aaKnown RBP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 ESRRGP62508 458 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 BDH1Q02338 343 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF616Q08AN1 781 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 PTK6Q13882 451 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 CAVIN1Q6NZI2 390 aaKnown RBP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 TMIGD1Q6UXZ0 262 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 ACOT7LQ6ZUV0 252 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 C1orf186Q6ZWK4 172 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 THNSL1Q8IYQ7 743 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 C1orf64Q8NEQ6 169 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 WDR36Q8NI36 951 aaKnown RBP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 MR1Q95460 341 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 CYP2S1Q96SQ9 504 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 RNF5Q99942 180 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 KLHDC3Q9BQ90 382 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 CBWD1Q9BRT8 395 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 NFKBIZQ9BYH8 718 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 ZNF385DQ9H6B1 395 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 RAB23Q9ULC3 237 aa0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 CHTOPQ9Y3Y2 248 aaKnown RBP0.22□□□□□ -2.37
RNU6-238P-201ENST00000363313 A0A1B0GVX0 72 aa0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 PLAC8L1A1L4L8 177 aa0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 SLC31A2O15432 143 aa0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 UQCRFS1P1P0C7P4 283 aa0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 ZDHHC11BP0C7U3 371 aa0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 CTNNA1P35221 906 aaKnown RBP0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 NOVA1P51513 510 aaKnown RBP0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 TSPY1Q01534 308 aa0.21□□□□□ -2.38
RNU6-238P-201ENST00000363313 SMARCB1Q12824 385 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms