RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 NOX4Q9NPH5 578 aa12.71□□□□□ -0.37
SGMS1-202ENST00000361781 MKL2Q9ULH7 1088 aa12.71□□□□□ -0.37
SGMS1-202ENST00000361781 E9PI62 339 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 PEX14O75381 377 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 AGR2O95994 175 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 TACSTD2P09758 323 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 CCKBRP32239 447 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 HMGA2P52926 109 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 ART1P52961 327 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 PCBP3P57721 371 aaKnown RBP12.71□□□□□ -0.38
SGMS1-202ENST00000361781 C1orf61Q13536 156 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 TMEM35AQ53FP2 167 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 SAMD14Q8IZD0 417 aaPredicted RBP12.71□□□□□ -0.38
SGMS1-202ENST00000361781 SPERTQ8NA61 448 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 OR5K2Q8NHB8 316 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 ELP4Q96EB1 424 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 ABHD1Q96SE0 405 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 TAPBPLQ9BX59 468 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 COPZ2Q9P299 210 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 ASB4Q9Y574 426 aa12.71□□□□□ -0.38
SGMS1-202ENST00000361781 RLFQ13129 1914 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 IGLV3-16A0A075B6K0 115 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 CLEC3AO75596 197 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 RAF1P04049 648 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 APODP05090 189 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 NPR2P20594 1047 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 PSMB1P20618 241 aaKnown RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TRHRP34981 398 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 ILF3Q12906 894 aaKnown RBP eCLIP12.7□□□□□ -0.383e-13■■■■■ 49.5
SGMS1-202ENST00000361781 PRSS53Q2L4Q9 553 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TRMT12Q53H54 448 aaKnown RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 C1orf94Q6P1W5 598 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TMEM150AQ86TG1 271 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 OR56B4Q8NH76 319 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 DVL3Q92997 716 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 NMNAT3Q96T66 252 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TEAD3Q99594 435 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 BTBD2Q9BX70 525 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 SGPP1Q9BX95 441 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 PELI2Q9HAT8 420 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 MRPS33Q9Y291 106 aaKnown RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 SBF1O95248 1867 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 CD2P06729 351 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TFPIP10646 304 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 CEBPBP17676 345 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 HTR4Q13639 388 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 NDUFAF7Q7L592 441 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 PDZD9Q8IXQ8 264 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 KIAA1143Q96AT1 154 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 VN1R3Q9BXE9 311 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 RAB11FIP5Q9BXF6 653 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 MFFQ9GZY8 342 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 B3GNT2Q9NY97 397 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 KCNN3Q9UGI6 736 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 ZNF646O15015 1829 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 LRIT2A6NDA9 550 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TRIM3O75382 744 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 ACTC1P68032 377 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 ACTA1P68133 377 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 ERV3-1Q14264 604 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TMEM215Q68D42 235 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 Q6ZNB5 142 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 TMPRSS9Q7Z410 1059 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 CMKLR1Q99788 373 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 GSX2Q9BZM3 304 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 C6orf106Q9H6K1 298 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-202ENST00000361781 SLC25A19Q9HC21 320 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 HRASLS2Q9NWW9 162 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 SPHK1Q9NYA1 384 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 KLK11Q9UBX7 282 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 SCP2D1Q9UJQ7 156 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 ADAM18Q9Y3Q7 739 aa12.7□□□□□ -0.38
SGMS1-202ENST00000361781 DISC1C4P0D8 188 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 EEF1E1-BLOC1S5C9J1V9 151 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 F13BP05160 661 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 SPARCP09486 303 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 RBMS1P29558 406 aaKnown RBP12.69□□□□□ -0.38
SGMS1-202ENST00000361781 PKLRP30613 574 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 CEBPGP53567 150 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 PDE7AQ13946 482 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 DUSP5Q16690 384 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.69□□□□□ -0.388e-9■■□□□ 13.4
SGMS1-202ENST00000361781 ZBTB37Q5TC79 503 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 METTL11BQ5VVY1 283 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
SGMS1-202ENST00000361781 MBOAT2Q6ZWT7 520 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 SLC35F2Q8IXU6 374 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 TCTE3Q8IZS6 198 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 BEST3Q8N1M1 668 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 OR52I2Q8NH67 350 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 DUSP19Q8WTR2 217 aa12.69□□□□□ -0.38
SGMS1-202ENST00000361781 HERVK_113Q902F9 699 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms