RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 Q9N2J8 555 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 SIGLEC7Q9Y286 467 aa20.82■□□□□ 0.92
LDB1-201ENST00000361198 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.81■□□□□ 0.92
LDB1-201ENST00000361198 SMIM30A4D0T7 59 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 ZNF749O43361 778 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 IFNA16P05015 189 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 SAGP10523 405 aaPredicted RBP20.81■□□□□ 0.92
LDB1-201ENST00000361198 CD1CP29017 333 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 KIR2DL3P43628 341 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 CAV3P56539 151 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 HSD17B7P56937 341 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 FUT7Q11130 342 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 PLBD1Q6P4A8 553 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 B3GLCTQ6Y288 498 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 CXXC5Q7LFL8 322 aaKnown RBP20.81■□□□□ 0.92
LDB1-201ENST00000361198 BMP8AQ7Z5Y6 402 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 DCLRE1CQ96SD1 692 aaKnown RBP20.81■□□□□ 0.92
LDB1-201ENST00000361198 ASB6Q9NWX5 421 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 H2AFY2Q9P0M6 372 aaPredicted RBP20.81■□□□□ 0.92
LDB1-201ENST00000361198 POLHQ9Y253 713 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 CACNA1IQ9P0X4 2223 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 UNC13CQ8NB66 2214 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 TMEM265A0A087WTH1 108 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 RHPN2P1A8MT19 583 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 IL9P15248 144 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 PTBP1P26599 531 aaKnown RBP eCLIP20.81■□□□□ 0.92
LDB1-201ENST00000361198 DBPQ10586 325 aaPredicted RBP20.81■□□□□ 0.92
LDB1-201ENST00000361198 KLHL36Q8N4N3 616 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 RNF121Q9H920 327 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 LRIT1Q9P2V4 623 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 TMEM5Q9Y2B1 443 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 RNF215Q9Y6U7 377 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 HEATR5AQ86XA9 2040 aa20.81■□□□□ 0.92
LDB1-201ENST00000361198 TRAV27A0A087WT01 109 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 FITM1A5D6W6 292 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 NPIPB9F8W1W9 429 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 HYAL3O43820 417 aaPredicted RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 BCKDHBP21953 392 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 GALP22466 123 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 MYL9P24844 172 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 CTBP2P56545 445 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 RIN1Q13671 783 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 FGFBP1Q14512 234 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 ZNF141Q15928 474 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 PTCRAQ6ISU1 281 aaPredicted RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 LNX2Q8N448 690 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 DNAJA4Q8WW22 397 aaPredicted RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 ZDHHC12Q96GR4 267 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 FRMD6Q96NE9 622 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 ATF6BQ99941 703 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 MED20Q9H944 212 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 COMMD3Q9UBI1 195 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 EPHA6Q9UF33 1036 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 A0A0B4J293 547 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 H0YIG0 161 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 J3QRE1 110 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 PIAS2O75928 621 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 RCBTB2O95199 551 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 NGFRP08138 427 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 CELP19835 753 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 APEX1P27695 318 aaKnown RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 EVX1P49640 407 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 ALG10BQ5I7T1 473 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 LCN1P1Q5VSP4 162 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 VASNQ6EMK4 673 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 CNIH2Q6PI25 160 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 SIX5Q8N196 739 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 ZNF615Q8N8J6 731 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 OR51A7Q8NH64 312 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 NACC2Q96BF6 587 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 RNF31Q96EP0 1072 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 ZC3HAV1LQ96H79 300 aaKnown RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 SECISBP2Q96T21 854 aaKnown RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 ZNF426Q9BUY5 554 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 EVA1AQ9H8M9 152 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.8■□□□□ 0.92
LDB1-201ENST00000361198 PCDHGB7Q9Y5F8 929 aa20.8■□□□□ 0.92
LDB1-201ENST00000361198 SHISA3A0PJX4 238 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 GABRPO00591 440 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 PRKNO60260 465 aaPredicted RBP20.79■□□□□ 0.92
LDB1-201ENST00000361198 CFL1P23528 166 aaKnown RBP20.79■□□□□ 0.92
LDB1-201ENST00000361198 ATP6V1E1P36543 226 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 CDK10Q15131 360 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 SIRT6Q8N6T7 355 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 BCORP1Q8N888 145 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 LSMEM1Q8N8F7 131 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 OR4C3Q8NH37 302 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 G6PC3Q9BUM1 346 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 HCAR1Q9BXC0 346 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 HDHD5Q9BXW7 423 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 TRIM2Q9C040 744 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 RAB33BQ9H082 229 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 OR10H1Q9Y4A9 318 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 ATP12AP54707 1039 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 OR1D5P58170 312 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 GRM7Q14831 915 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 NDUFAF6Q330K2 333 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 OR51G2Q8NGK0 314 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 NEIL3Q8TAT5 605 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms