RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 DPH1Q9BZG8 443 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 FAM227AF5H4B4 570 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 VNN1O95497 513 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 MLLT11Q13015 90 aaPredicted RBP8.75□□□□□ -1.01
VPS13A-203ENST00000360280 MSS51Q4VC12 460 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 CSNK1A1LQ8N752 337 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 NPIPA5A0A0B4J1W7 369 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 A6NCN8 305 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 PRAMEF11O60813 436 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 FAM163BP0C2L3 166 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 NNATQ16517 81 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 ENTHD1Q8IYW4 607 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 GAB3Q8WWW8 586 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 DNAJA3Q96EY1 480 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 C4orf36Q96KX1 117 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 FKRPQ9H9S5 495 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 AGPAT4Q9NRZ5 378 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 GAB2Q9UQC2 676 aa8.75□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM235A6NFC5 223 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 PAX6P26367 422 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 NPRL2Q8WTW4 380 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 RBPMSQ93062 196 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 WDR92Q96MX6 357 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 PCDHB10Q9UN67 800 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM131LA2VDJ0 1609 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 hCG_1809904A0A1W2PP81 198 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 A0A1W2PPE2 198 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 A0A1W2PR64 198 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 A0A1W2PRV1 198 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TGOLN2O43493 480 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 GKP32189 559 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 YIPF5Q969M3 257 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SLC25A18Q9H1K4 315 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TM7SF3Q9NS93 570 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 UGT2A1Q9Y4X1 527 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF142P52746 1687 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FEZF1A0PJY2 475 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 IGFBP1P08833 259 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 HOXB5P09067 269 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SRYQ05066 204 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 GLYR1Q49A26 553 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ADAMTS16Q8TE57 1224 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 OPA3Q9H6K4 179 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 BABAM2Q9NXR7 383 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 PLEK2Q9NYT0 353 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ETV4P43268 484 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 NDUFA6P56556 154 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF836Q6ZNA1 936 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FAM185AQ8N0U4 392 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 KCNRGQ8N5I3 272 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 OR8U1Q8NH10 309 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FCER1GP30273 86 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FLT3LGP49771 235 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SUOXP51687 545 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CPOQ8IVL8 374 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 C14orf79Q96F83 325 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 LMF2Q9BU23 707 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 UGDHO60701 494 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 S100A11P31949 105 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ERVFC1P60507 584 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF691Q5VV52 312 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 MCTS1Q9ULC4 181 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CACNG3O60359 315 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ADAMTS4O75173 837 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 USP2O75604 605 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SORDQ00796 357 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 IL22RA1Q8N6P7 574 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TANKQ92844 425 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ARSGQ96EG1 525 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 GAR1Q9NY12 217 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 GOLT1BQ9Y3E0 138 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 YY2O15391 372 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FABP1P07148 127 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SPCS2Q15005 226 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF322Q6U7Q0 402 aaPredicted RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SAMD8Q96LT4 415 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 LAMB1P07942 1786 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 A0A0B4J2A0 478 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 FECHP22830 423 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 VEZF1Q14119 521 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 AADACL3Q5VUY0 350 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CMTM8Q8IZV2 173 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 EXOSC3Q9NQT5 275 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SHPKQ9UHJ6 478 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SMLR1H3BR10 107 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 OR10J4P0C629 311 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TRAPPC2P0DI81 140 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TRAPPC2BP0DI82 140 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 CTRB1P17538 263 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 RPS15P62841 145 aaKnown RBP8.74□□□□□ -1.01
VPS13A-203ENST00000360280 SELENOWP63302 87 aa8.74□□□□□ -1.01
VPS13A-203ENST00000360280 TBCEQ15813 527 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms