RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CBLN3Q6UW01 205 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 WDR88Q6ZMY6 472 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 PRICKLE2Q7Z3G6 844 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 RPS19BP1Q86WX3 136 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 NRMQ8IXM6 262 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 ARMC10Q8N2F6 343 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 B4GALNT2Q8NHY0 566 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF563Q8TA94 476 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 SH3YL1Q96HL8 342 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 FAM46AQ96IP4 442 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 CDCP1Q9H5V8 836 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 SDHAF3Q9NRP4 125 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 KLRF1Q9NZS2 232 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 MRPS18BQ9Y676 258 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 MYO9AB2RTY4 2548 aa12.64□□□□□ -0.39
PDLIM5-203ENST00000359265 ELOA3DA6NLF2 546 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 PNMTP11086 282 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 IFI30P13284 250 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 LIFP15018 202 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 FPR3P25089 353 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 GGT2P36268 569 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 GPR4P46093 362 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 P2RX1P51575 399 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 IL5RAQ01344 420 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 C17orf67Q0P5P2 114 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ATP1A4Q13733 1029 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF791Q3KP31 576 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ELOA3BQ3SY89 546 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 JMJD6Q6NYC1 403 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 CDK20Q8IZL9 346 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF786Q8N393 782 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ELOA3Q8NG57 546 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 OR5W2Q8NH69 310 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ADAMTS17Q8TE56 1095 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 C3orf49Q96BT1 292 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 WBP1Q96G27 269 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 RTN4RQ9BZR6 473 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF696Q9H7X3 374 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 METTL7AQ9H8H3 244 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 C12orf10Q9HB07 376 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 CNIH4Q9P003 139 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 SCOCQ9UIL1 159 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 MYRFQ9Y2G1 1151 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 PCDHGB5Q9Y5G0 923 aa12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 ANKRD17O75179 2603 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-203ENST00000359265 A0A087WUJ7 227 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 H3BN98 237 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 RRP8O43159 456 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 SOX14O95416 240 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 NTN1O95631 604 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 NUDT14O95848 222 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 GP1BBP13224 206 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 CHMP24386 653 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 POU1F1P28069 291 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 EPHA2P29317 976 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 CTBP2P56545 445 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 CDC42P60953 191 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 PRKCDQ05655 676 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 TOP3AQ13472 1001 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 TGIF1Q15583 401 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 KCTD21Q4G0X4 260 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 H3F3CQ6NXT2 135 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 TMEM81Q6P7N7 255 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 RASSF6Q6ZTQ3 369 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 TMEM156Q8N614 296 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 OR10G3Q8NGC4 313 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 TEX47Q8TBZ9 253 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 FGF11Q92914 225 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 FER1L6-AS2Q96M78 137 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 SECISBP2Q96T21 854 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 ZNF426Q9BUY5 554 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 IMPAD1Q9NX62 359 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 PPP4R1LQ9P1A2 415 aa12.62□□□□□ -0.39
PDLIM5-203ENST00000359265 ANKUB1A6NFN9 424 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 KPNA4O00629 521 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 ADAM10O14672 748 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 KLF4O43474 513 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 CDC40O60508 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 TP53P04637 393 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 PTNP21246 168 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 MSX1P28360 303 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 SLC1A3P43003 542 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 GAS1P54826 345 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 RRADP55042 308 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 ISL1P61371 349 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 CD47Q08722 323 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 Q0VFX4 171 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 CLN3Q13286 438 aa12.61□□□□□ -0.39
PDLIM5-203ENST00000359265 PTGES3Q15185 160 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms