RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 RNF217Q8TC41 542 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 GRHL3Q8TE85 626 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM234Q8WY98 164 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 HGDQ93099 445 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 PMEPA1Q969W9 287 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 C3orf49Q96BT1 292 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 IP6K3Q96PC2 410 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 GPA33Q99795 319 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 ADAM19Q9H013 955 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 ZBTB20Q9HC78 741 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-201ENST00000359253 TBC1D23Q9NUY8 699 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 FKBP14Q9NWM8 211 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CNIH4Q9P003 139 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 PSORS1C1Q9UIG5 152 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CARD8Q9Y2G2 431 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 YARS2Q9Y2Z4 477 aaKnown RBP12.34□□□□□ -0.43
CCDC197-201ENST00000359253 RPL36Q9Y3U8 105 aaKnown RBP12.34□□□□□ -0.43
CCDC197-201ENST00000359253 HS3ST3B1Q9Y662 390 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 PTGES3LE9PB15 166 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF701M0R085 212 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 TP53I11O14683 189 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 HCRTR2O43614 444 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 PRKNO60260 465 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ADAM11O75078 769 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 SOX14O95416 240 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 FMO3P31513 532 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 DLX5P56178 289 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 EFNB1P98172 346 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 SNTA1Q13424 505 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 NTRK2Q16620 822 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 TMEM236Q5W0B7 351 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 OPN5Q6U736 354 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ISLR2Q6UXK2 745 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 WDR88Q6ZMY6 472 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 Q6ZPB1 254 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 RTL4Q6ZR62 310 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ATG4DQ86TL0 474 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 SATL1Q86VE3 508 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 KIF18BQ86Y91 864 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 NLGN4XQ8N0W4 816 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 TMCO5AQ8N6Q1 288 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 NLGN4YQ8NFZ3 816 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 OR11G2Q8NGC1 345 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 B4GALNT2Q8NHY0 566 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF563Q8TA94 476 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 C9orf43Q8TAL5 461 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-201ENST00000359253 CT55Q8WUE5 264 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 LIPHQ8WWY8 451 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 FCGR1BQ92637 280 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 C8orf44Q96CB5 159 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 SGTBQ96EQ0 304 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 TSSK6Q9BXA6 273 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 DPH1Q9BZG8 443 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 NDEL1Q9GZM8 345 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 FN3KQ9H479 309 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
CCDC197-201ENST00000359253 IGLV3-32A0A0A0MS00 114 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 C1QTNF9BB2RNN3 333 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 WWP2O00308 870 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 CDK2AP1O14519 115 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 SOCS6O14544 535 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 XPNPEP2O43895 674 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 PTP4A3O75365 173 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 HPP00738 406 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 C1QTNF9P0C862 333 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
CCDC197-201ENST00000359253 GP1BBP13224 206 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 GRK5P34947 590 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 GPR4P46093 362 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 SH3BGRP55822 239 aaPredicted RBP12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF117Q03924 483 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 SNAPC1Q16533 368 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 SMARCD3Q6STE5 483 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
CCDC197-201ENST00000359253 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 CCDC103Q8IW40 242 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF248Q8NDW4 579 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF420Q8TAQ5 688 aaPredicted RBP12.32□□□□□ -0.44
CCDC197-201ENST00000359253 TMEM163Q8TC26 289 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 RFKQ969G6 155 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 UBE2FQ969M7 185 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 PLEKHA8Q96JA3 519 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 COPS4Q9BT78 406 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 OR52D1Q9H346 318 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 CPNE5Q9HCH3 593 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 MEPEQ9NQ76 525 aaPredicted RBP12.32□□□□□ -0.44
CCDC197-201ENST00000359253 TVP23BQ9NYZ1 205 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 SIGLEC7Q9Y286 467 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF337Q9Y3M9 751 aa12.32□□□□□ -0.44
CCDC197-201ENST00000359253 ANKUB1A6NFN9 424 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 PIP5K1CO60331 668 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 CDK1P06493 297 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 MAKP20794 623 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms