RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TRMT61AQ96FX7 289 aaKnown RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 ZDHHC12Q96GR4 267 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 TEAD3Q99594 435 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 GABRG3Q99928 467 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 MENTQ9BUN1 341 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 SEMA6CQ9H3T2 930 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 FKBP14Q9NWM8 211 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 IL20Q9NYY1 176 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 MRPS17Q9Y2R5 130 aaKnown RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 ANXA2P2A6NMY6 339 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 POLR1CO15160 346 aaPredicted RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 HRO43593 1189 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 SLC19A2O60779 497 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 PLGP00747 810 aaPredicted RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 ANXA2P07355 339 aaKnown RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 THBS1P07996 1170 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 TPBGQ13641 420 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 GRM7Q14831 915 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 HSD17B12Q53GQ0 312 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 FAM27D1Q5T7N8 215 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 PAMR1Q6UXH9 720 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 NT5CQ8TCD5 201 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 ZNF764Q96H86 408 aaPredicted RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 TMEM246Q9BRR3 403 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
SSU72-202ENST00000359060 MRPL15Q9P015 296 aaKnown RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 DHCR7Q9UBM7 475 aaKnown RBP10.35□□□□□ -0.75
SSU72-202ENST00000359060 TRDV1A0A1B0GX56 115 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 CDHR4A6H8M9 788 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 PAHP00439 452 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 CT62P0C5K7 136 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 PEPDP12955 493 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 NKAIN2Q5VXU1 208 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 SIRT6Q8N6T7 355 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 OR6C4Q8NGE1 309 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 OR51Q1Q8NH59 317 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 METTL21AQ8WXB1 218 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 NMNAT3Q96T66 252 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 FAM60AQ9NP50 221 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 FGF20Q9NP95 211 aaPredicted RBP10.34□□□□□ -0.75
SSU72-202ENST00000359060 LRIT1Q9P2V4 623 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 PLCL2Q9UPR0 1127 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 ZNF879B4DU55 563 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 F13BP05160 661 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 YES1P07947 543 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 ANGPT1Q15389 498 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 MS4A15Q8N5U1 240 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 THAP4Q8WY91 577 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 GHSRQ92847 366 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 TP63Q9H3D4 680 aaPredicted RBP10.34□□□□□ -0.75
SSU72-202ENST00000359060 ADAM18Q9Y3Q7 739 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 UGT2A1Q9Y4X1 527 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 HS3ST3A1Q9Y663 406 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 TVP23AA6NH52 213 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 TRIM64BA6NI03 449 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 NDUFB5O43674 189 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 RECKO95980 971 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 CD38P28907 300 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 GDI2P50395 445 aaKnown RBP10.34□□□□□ -0.75
SSU72-202ENST00000359060 NR0B1P51843 470 aaKnown RBP10.34□□□□□ -0.75
SSU72-202ENST00000359060 SLC29A4Q7RTT9 530 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 POMGNT2Q8NAT1 580 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 OR52N1Q8NH53 320 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 BARHL1Q9BZE3 327 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 NRSN2Q9GZP1 204 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 OR10A5Q9H207 317 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 WSB2Q9NYS7 404 aaPredicted RBP10.34□□□□□ -0.75
SSU72-202ENST00000359060 LAMP5Q9UJQ1 280 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 ACAD8Q9UKU7 415 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 ING4Q9UNL4 249 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 BAIAP2Q9UQB8 552 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 FAM186AA6NE01 2351 aa10.34□□□□□ -0.75
SSU72-202ENST00000359060 TACSTD2P09758 323 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 GSTT2P0CG29 244 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 GSTT2BP0CG30 244 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 SELENBP1Q13228 472 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 NIPAL3Q6P499 406 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 ZCCHC12Q6PEW1 402 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 C11orf88Q6PI97 169 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 TMEM52Q8NDY8 209 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 NSMAFQ92636 917 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 ZNF486Q96H40 463 aaPredicted RBP10.33□□□□□ -0.76
SSU72-202ENST00000359060 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 STACQ99469 402 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 ZNF350Q9GZX5 532 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 SLC25A18Q9H1K4 315 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 MRPL39Q9NYK5 338 aaKnown RBP10.33□□□□□ -0.76
SSU72-202ENST00000359060 PCDHGB2Q9Y5G2 931 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 ASXL3Q9C0F0 2248 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 IQCMA0A1B0GVH7 501 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 CHP2O43745 196 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 SRPX2O60687 465 aaPredicted RBP10.33□□□□□ -0.76
SSU72-202ENST00000359060 ITGA10O75578 1167 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 EMDP50402 254 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 HNRNPKP61978 463 aaKnown RBP eCLIP10.33□□□□□ -0.76
SSU72-202ENST00000359060 HTR4Q13639 388 aa10.33□□□□□ -0.76
SSU72-202ENST00000359060 KCNAB1Q14722 419 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms