RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ADAMTS5Q9UNA0 930 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 METTL15A6NJ78 407 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 TXNL1O43396 289 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 RAB5CP51148 216 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 ILKQ13418 452 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 ALKAL2Q6UX46 152 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SMIM3Q9BZL3 60 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 RLIMQ9NVW2 624 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 ZNF225Q9UK10 706 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 ADAM18Q9Y3Q7 739 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 A0A0J9YY10 115 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 OR6C65A6NJZ3 312 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 H3BML4 177 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SGCEO43556 437 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SLC16A7O60669 478 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 MTNR1BP49286 362 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 PRLHRP49683 370 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 SQSTM1Q13501 440 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 OR51Q1Q8NH59 317 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 DUSP19Q8WTR2 217 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 NANOS1Q8WY41 292 aaKnown RBP13.89□□□□□ -0.19
CHD4-201ENST00000357008 ZNF681Q96N22 645 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 RTP3Q9BQQ7 232 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 ADAM29Q9UKF5 820 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
CHD4-201ENST00000357008 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 SLC22A23A1A5C7 686 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OTOL1A6NHN0 477 aaPredicted RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 FABP7O15540 132 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 HNRNPA2B1P22626 353 aaKnown RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 GDNFP39905 211 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OPRD1P41143 372 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR52R1Q8NGF1 315 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 NME7Q9Y5B8 376 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 HSBP1L1C9JCN9 74 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 H0YIV9 168 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 HBQ1P09105 142 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 CLDN6P56747 220 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 PKDCCQ504Y2 493 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 WBP2NLQ6ICG8 309 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 ABHD12BQ7Z5M8 362 aaPredicted RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 ENTHD1Q8IYW4 607 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR52E1Q8NGJ3 308 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR10A5Q9H207 317 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR10A2Q9H208 303 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 PLCXD1Q9NUJ7 323 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 DIMT1Q9UNQ2 313 aaKnown RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 FBXO7Q9Y3I1 522 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 PDE4DIPQ5VU43 2346 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 A8MVJ9 347 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 UBL3O95164 117 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 ERVK-16P61578 105 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 CNTNAP3Q9BZ76 1288 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 SLC38A1Q9H2H9 487 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 GMPR2Q9P2T1 348 aaKnown RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 POU2F3Q9UKI9 436 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 TP53TG5Q9Y2B4 290 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR7A17O14581 309 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 GPR137BO60478 399 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 MSX1P28360 303 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 PKLRP30613 574 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 HTR3AP46098 478 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 SLC22A6Q4U2R8 563 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 TRNP1Q6NT89 227 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 APOOQ9BUR5 198 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 TUBG2Q9NRH3 451 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 TMEM269A0A1B0GVZ9 245 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OIP5O43482 229 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 MED6O75586 246 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 ACTL6BO94805 426 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 EDN1P05305 212 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 SNRPBP14678 240 aaKnown RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 TACR1P25103 407 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 EMP2P54851 167 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 SPOCK1Q08629 439 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 CNN3Q15417 329 aaKnown RBP13.88□□□□□ -0.19
CHD4-201ENST00000357008 RNF175Q8N4F7 328 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 CELF2-AS1Q8N7Q2 184 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR9A4Q8NGU2 314 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR2T11Q8NH01 316 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR14L1PQ8NHC6 308 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 TXNDC15Q96J42 360 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 OR5B2Q96R09 309 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 UGT2A1Q9Y4X1 527 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 RICTORQ6R327 1708 aa13.88□□□□□ -0.19
CHD4-201ENST00000357008 FADS1O60427 444 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 LDB3O75112 727 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 SEMA4FO95754 770 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 RGRP47804 291 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 BEX5Q5H9J7 111 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 KIAA0895LQ68EN5 471 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 MZB1Q8WU39 189 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms