RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ATP1B1P05026 303 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 UCHL1P09936 223 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 RAB5AP20339 215 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 S100A2P29034 98 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 MEF2AQ02078 507 aaPredicted RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 ZNF852Q6ZMS4 543 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 LINGO2Q7L985 606 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 TECPR1Q7Z6L1 1165 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 ANGPTL5Q86XS5 388 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 OR52N2Q8NGI0 321 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 MED10Q9BTT4 135 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 CCDC86Q9H6F5 360 aaKnown RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 TUBA4BQ9H853 241 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 RDH14Q9HBH5 336 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 TMEM100Q9NV29 134 aa14.61□□□□□ -0.07
RTN3-205ENST00000356000 EXOGQ9Y2C4 368 aaKnown RBP14.61□□□□□ -0.07
RTN3-205ENST00000356000 TMEM272A0A1B0GTI8 110 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ANKRD20A5PA0PJZ0 165 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 FAM86C2PA6NEL3 165 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 SYT5O00445 386 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ZNF749O43361 778 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 SH3BGRLO75368 114 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 GJB3O75712 270 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 H1F0P07305 194 aaKnown RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 ATF1P18846 271 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 EPORP19235 508 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ACKR3P25106 362 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 CD81P60033 236 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 MAPK14Q16539 360 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 RAB41Q5JT25 222 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 IL34Q6ZMJ4 242 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 OR5T3Q8NGG3 340 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 OR2G2Q8NGZ5 317 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 OR10J5Q8NHC4 309 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 STOML3Q8TAV4 291 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 C3orf49Q96BT1 292 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ELF4Q99607 663 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 UNKLQ9H9P5 680 aaKnown RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 KLHL9Q9P2J3 617 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 GJD2Q9UKL4 321 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 GPR52Q9Y2T5 361 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 PCDHB1Q9Y5F3 818 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 SCAMP2O15127 329 aaKnown RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 ADH1AP07327 375 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 SBK2P0C263 348 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 GABRR2P28476 465 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ANXA11P50995 505 aaKnown RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 SEMG2Q02383 582 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 NHLH2Q02577 135 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 NDUFA9Q16795 377 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ZNF630Q2M218 657 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 SLC35D3Q5M8T2 416 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 AADACL4Q5VUY2 407 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 PRSS55Q6UWB4 352 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 DNAJB7Q7Z6W7 309 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 MRGPREQ86SM8 312 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 SDR9C7Q8NEX9 313 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 OR5D16Q8NGK9 328 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 TFGQ92734 400 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 SLC22A18Q96BI1 424 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 ECHDC3Q96DC8 303 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 FCRL2Q96LA5 508 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 ORAI3Q9BRQ5 295 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 PRDM5Q9NQX1 630 aaPredicted RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 GAR1Q9NY12 217 aaKnown RBP14.6□□□□□ -0.07
RTN3-205ENST00000356000 TNFSF18Q9UNG2 199 aa14.6□□□□□ -0.07
RTN3-205ENST00000356000 PLXNB2O15031 1838 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 NINQ8N4C6 2090 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 TRBC1P01850 177 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 UBE2MP61081 183 aaKnown RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 LSM6P62312 80 aaKnown RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 PJVKQ0ZLH3 352 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 BIKQ13323 160 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 TDGQ13569 410 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 GGTA1PQ4G0N0 100 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 CPTPQ5TA50 214 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 ANXA8L1Q5VT79 327 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 LRRC56Q8IYG6 542 aaPredicted RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 MUC20Q8N307 709 aaPredicted RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 GTPBP8Q8N3Z3 284 aaPredicted RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 SEMA3CQ99985 751 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 SMG9Q9H0W8 520 aaKnown RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 MVB12BQ9H7P6 319 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 C19orf12Q9NSK7 152 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 A6NLC8 198 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 FADS1O60427 444 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 STK16O75716 305 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 EPHX1P07099 455 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 GLP1RP43220 463 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 CDH11P55287 796 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 EIF4EBP2Q13542 120 aaPredicted RBP14.59□□□□□ -0.07
RTN3-205ENST00000356000 GAMTQ14353 236 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 TEAD2Q15562 447 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 OR8G1Q15617 311 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 AARDQ4LEZ3 155 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 THEM4Q5T1C6 240 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 TCTN3Q6NUS6 607 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 PAQR8Q8TEZ7 354 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 HMCESQ96FZ2 354 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 SMARCD1Q96GM5 515 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms