RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 KLF4O43474 513 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CYP7B1O75881 506 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 WISP2O76076 250 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 INMTO95050 263 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ATE1O95260 518 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 MED26O95402 600 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ZBTB11O95625 1053 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 CBX7O95931 251 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CT62P0C5K7 136 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ANKRD34CP0C6C1 535 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CCNYL3P0C7X3 344 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 AGAP20933 346 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 S1PR1P21453 382 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 MMP11P24347 488 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 FPR3P25089 353 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 GCGRP47871 477 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 AVPR1BP47901 424 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 IDH2P48735 452 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 ST13P50502 369 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 ZNF136P52737 540 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 GFERP55789 205 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 HSD17B7P56937 341 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 RGS8P57771 180 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 TAS2R41P59536 307 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 POU6F2P78424 691 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 ID2Q02363 134 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 PIGFQ07326 219 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ZNF155Q12901 538 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 TSPAN31Q12999 210 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 PIN1Q13526 163 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 SERTAD2Q14140 314 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 GRM7Q14831 915 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 OCLNQ16625 522 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 MEDAGQ5VYS4 303 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 RNLSQ5VYX0 342 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 PLEKHM3Q6ZWE6 761 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 AHSA2Q719I0 299 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 OLIG3Q7RTU3 272 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 PRSS42Q7Z5A4 293 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ZER1Q7Z7L7 766 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 RANBP3LQ86VV4 465 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 KMT5CQ86Y97 462 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 GRAMD2AQ8IUY3 354 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 GALNT12Q8IXK2 581 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CLDN22Q8N7P3 220 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 COX18Q8N8Q8 333 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 OR8J1Q8NGP2 316 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ACOT11Q8WXI4 607 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 GGHQ92820 318 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 MVB12AQ96EY5 273 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 Q96MT0 163 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 OR1F2PQ96R84 312 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 FUNDC2Q9BWH2 189 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CDCA4Q9BXL8 241 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 POLDIP3Q9BY77 421 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 CCDC90BQ9GZT6 254 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 NAA50Q9GZZ1 169 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 RACGAP1Q9H0H5 632 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 QRSL1Q9H0R6 528 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 ARMC7Q9H6L4 198 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 ADAP2Q9NPF8 381 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 NECTIN3Q9NQS3 549 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 RASSF1Q9NS23 344 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 C14orf105Q9NVL8 296 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CLN6Q9NWW5 311 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 FARSAQ9Y285 508 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 MMACHCQ9Y4U1 282 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 SONP18583 2426 aaKnown RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 A0A087WUU8 490 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 A0A0A6YYC8 382 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 IGHV5-51A0A0C4DH38 117 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 CDHR4A6H8M9 788 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 TGFBR3LH3BV60 316 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 I3L1I5 382 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 OR10H2O60403 315 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 FCMRO60667 390 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 TPST2O60704 377 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 PRAMEF2O60811 474 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 CLDN14O95500 239 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 POU2F1P14859 743 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 TRHRP34981 398 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 MAP2K4P45985 399 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 STT3AP46977 705 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 OMPP47874 163 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 EMDP50402 254 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 SMSP52788 366 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 PSMD4P55036 377 aaKnown RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 CDK5Q00535 292 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 IL11RAQ14626 422 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 ZNHIT3Q15649 155 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 CTF1Q16619 201 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 PWWP2BQ6NUJ5 590 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 CASP12Q6UXS9 341 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 RASSF6Q6ZTQ3 369 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 NCCRP1Q6ZVX7 275 aaPredicted RBP7.52□□□□□ -1.21
CD44-205ENST00000352818 PTCHD4Q6ZW05 846 aa7.52□□□□□ -1.21
CD44-205ENST00000352818 MBOAT2Q6ZWT7 520 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms