RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SLC34A3Q8N130 599 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CACTIN-AS1Q8N1I8 211 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF527Q8NB42 609 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 OR52L1Q8NGH7 329 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 OR2I1PQ8NGU4 316 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 FANK1Q8TC84 345 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 IFI44Q8TCB0 444 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 RFKQ969G6 155 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TP53INP1Q96A56 240 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 EFHD2Q96C19 240 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF524Q96C55 264 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 SGTBQ96EQ0 304 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 RNFT2Q96EX2 444 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 OR6C1Q96RD1 312 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM43Q9BTV4 400 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 MND1Q9BWT6 205 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 SLIRPQ9GZT3 109 aaKnown RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 WWTR1Q9GZV5 400 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 NXF2Q9GZY0 626 aaKnown RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 ADAM19Q9H013 955 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 SLC26A1Q9H2B4 701 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 SIAEQ9HAT2 523 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 C12orf10Q9HB07 376 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 CMC2Q9NRP2 79 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 EXOSC1Q9Y3B2 195 aaKnown RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 A3GALT2U3KPV4 340 aa6.34□□□□□ -1.39
TRIM55-203ENST00000350034 TP53BP1Q12888 1972 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-203ENST00000350034 NINQ8N4C6 2090 aa6.34□□□□□ -1.4
TRIM55-203ENST00000350034 CCDC182A6NF36 153 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 METTL15A6NJ78 407 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SAGE2PA6NJ88 616 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 D6RAR5 112 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 M0R3G1 203 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 KPNA4O00629 521 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SCDO00767 359 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF264O43296 627 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 FADS1O60427 444 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 EIF4E2O60573 245 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ICOSLGO75144 302 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ALOX12BO75342 701 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 REM1O75628 298 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SCRG1O75711 98 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 GPX5O75715 221 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 OR7A10O76100 309 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SLC2A10O95528 541 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CH25HO95992 272 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SYPP08247 313 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ZNF883P0CG24 379 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 LIMS3P0CW19 117 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 LIMS4P0CW20 117 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PNMTP11086 282 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SPTBP11277 2137 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PEPDP12955 493 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CPEP16870 476 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 BMP7P18075 431 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PTNP21246 168 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SLC2A5P22732 501 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 MST1P26927 711 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SLC6A6P31641 620 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SLC6A8P48029 635 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SLC9A3P48764 834 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CLK1P49759 484 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 NR0B1P51843 470 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PNLIPRP2P54317 469 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 LSM3P62310 102 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 RPS4XP62701 263 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 DCDP81605 110 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ACSM1Q08AH1 577 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 TPBGQ13641 420 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 IL11RAQ14626 422 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 MED22Q15528 200 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 TIMM50Q3ZCQ8 353 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 TRIM61Q5EBN2 209 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 ARMC4Q5T2S8 1044 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 WBP2NLQ6ICG8 309 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 NIPAL3Q6P499 406 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CBLN3Q6UW01 205 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 TMEM205Q6UW68 189 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 RTL4Q6ZR62 310 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 USP43Q70EL4 1123 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 MEPCEQ7L2J0 689 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CXXC5Q7LFL8 322 aaKnown RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 SLC29A4Q7RTT9 530 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CROCCP3Q8IVE0 287 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CPOQ8IVL8 374 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 GID4Q8IVV7 300 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PHC2Q8IXK0 858 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 PRSS58Q8IYP2 241 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 CADM2Q8N3J6 435 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 BMPERQ8N8U9 685 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 LRRC75AQ8NAA5 344 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 APCDD1LQ8NCL9 501 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 BBS1Q8NFJ9 593 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 KBTBD8Q8NFY9 601 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 OR6Q1Q8NGQ2 317 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 OR8K3Q8NH51 312 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 NUBPLQ8TB37 319 aa6.33□□□□□ -1.4
TRIM55-203ENST00000350034 RNF138Q8WVD3 245 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms