RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 NXF5Q9H1B4 397 aaKnown RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 YARS2Q9Y2Z4 477 aaKnown RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 CAB39Q9Y376 341 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 UGT2A1Q9Y4X1 527 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 RP1P56715 2156 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 ISPDA4D126 451 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 FRG2CA6NGY1 282 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 AGRPO00253 132 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 CTDSP2O14595 271 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 PPP1R3DO95685 299 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 DDAH2O95865 285 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 PDGFBP01127 241 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 HK1P19367 917 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 SPANXN2Q5MJ10 180 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 YOD1Q5VVQ6 348 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF322Q6U7Q0 402 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 B3GLCTQ6Y288 498 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 PLEKHG7Q6ZR37 379 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF721Q8TF20 911 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 SPRYD4Q8WW59 207 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC25A46Q96AG3 418 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 CCDC74AQ96AQ1 378 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 KCTD7Q96MP8 289 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 SMURF1Q9HCE7 757 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 FSCN3Q9NQT6 498 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 TOR4AQ9NXH8 423 aa18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 ARID1BQ8NFD5 2236 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-202ENST00000348639 MUC3AQ02505 3323 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 TCRBV16S1A1N1A0A5B0 115 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 CDRT1O95170 752 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 HPGDP15428 266 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF3P17036 446 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 TGM1P22735 817 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 FGF9P31371 208 aaPredicted RBP18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF791Q3KP31 576 aaPredicted RBP18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 CRTC2Q53ET0 693 aaPredicted RBP18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 KLHL12Q53G59 568 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 ARHGAP11AQ6P4F7 1023 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 C3orf49Q96BT1 292 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 SGTBQ96EQ0 304 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 LCORQ96JN0 433 aaPredicted RBP18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 TEAD3Q99594 435 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 TM9SF2Q99805 663 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 MED18Q9BUE0 208 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 VPS13AQ96RL7 3174 aa18.68■□□□□ 0.58
CHRNA3-202ENST00000348639 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 A0A1B0GX78 115 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ZC3H12DA2A288 527 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 FUOMA2VDF0 154 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 CCDC182A6NF36 153 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 C19orf67A6NJJ6 358 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 C12orf71A8MTZ7 269 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 GNB5O14775 395 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 PPM1BO75688 479 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 RUNX1T1Q06455 604 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 C1orf189Q5VU69 101 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 TMPRSS11AQ6ZMR5 421 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 LYSMD2Q8IV50 215 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ZFP41Q8N8Y5 198 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ADIPOR1Q96A54 375 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF501Q96CX3 271 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 CCNL2Q96S94 520 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF768Q9H5H4 540 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ABCB10Q9NRK6 738 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 MRTO4Q9UKD2 239 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 GSTK1Q9Y2Q3 226 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 SEC16AO15027 2179 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 IQCMA0A1B0GVH7 501 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 TRDV1A0A1B0GX56 115 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 SCDO00767 359 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 NDUFB2O95178 105 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC2A5P22732 501 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 NOS3P29474 1203 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC9A3P48764 834 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 EFNA3P52797 238 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 FABP5Q01469 135 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 BDH1Q02338 343 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 CRMP1Q14194 572 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 CD226Q15762 336 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 VWA2Q5GFL6 755 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 FCRLBQ6BAA4 426 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 ZNF554Q86TJ5 538 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 PRSS58Q8IYP2 241 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 DRAXINQ8NBI3 349 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 CEP19Q96LK0 163 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 COQ7Q99807 217 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 DPYSL5Q9BPU6 564 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 IER2Q9BTL4 223 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 SLC19A3Q9BZV2 496 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 RERGLQ9H628 205 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 EXOSC3Q9NQT5 275 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 INPP5EQ9NRR6 644 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 FGF21Q9NSA1 209 aa18.67■□□□□ 0.58
CHRNA3-202ENST00000348639 LRRTM2O43300 516 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 TBX1O43435 398 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 UTS2O95399 124 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 IFNGP01579 166 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 UBL4AP11441 157 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 BCAP31P51572 246 aa18.66■□□□□ 0.58
CHRNA3-202ENST00000348639 DCAF7P61962 342 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms