RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 OSGIN1Q9UJX0 560 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 MPDZO75970 2070 aa17.22■□□□□ 0.35
CHMP4A-201ENST00000347519 A0A1W2PRQ8 180 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 ADAMDEC1O15204 470 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 CHP2O43745 196 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 CELA3AP09093 270 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 UQCRBP14927 111 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 CCNA2P20248 432 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 IL11P20809 199 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF41P51814 821 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 DSCR4P56555 118 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 PLGLB1Q02325 96 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC34A1Q06495 639 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 DGCR6Q14129 220 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 TRAM2Q15035 370 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 TMEM44Q2T9K0 475 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 PLEKHN1Q494U1 663 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 NADK2Q4G0N4 442 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC25A53Q5H9E4 307 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 FGD3Q5JSP0 725 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 COLEC12Q5KU26 742 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 ULK3Q6PHR2 472 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 POMZP3Q6PJE2 187 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 LINC00114Q6XXX2 140 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 YRDCQ86U90 279 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 P3H2Q8IVL5 708 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 TMEM255BQ8WV15 326 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 ST8SIA1Q92185 356 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 NR4A3Q92570 626 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC38A4Q969I6 547 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 ALPK1Q96QP1 1244 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 EPYCQ99645 322 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 ARHGAP9Q9BRR9 750 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 HHATLQ9HCP6 504 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 LUZP4Q9P127 313 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 DKKL1Q9UK85 242 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 RPH3AQ9Y2J0 694 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 MED12Q93074 2177 aa17.21■□□□□ 0.35
CHMP4A-201ENST00000347519 IGKV1D-42A0A075B6H8 117 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 A0A087WUU8 490 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 PIP5K1CO60331 668 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 THRBP10828 461 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 GDF1P27539 372 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 SRD5A2P31213 254 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 MAGEA5P43359 124 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 UGT2B15P54855 530 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 B3GALT5-AS1P59052 145 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 MERTKQ12866 999 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 HYAL4Q2M3T9 481 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 LPCAT4Q643R3 524 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 GRINAQ7Z429 371 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 MEX3DQ86XN8 651 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 ADGRG3Q86Y34 549 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 FAM83FQ8NEG4 500 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 DNAJA4Q8WW22 397 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 NRG4Q8WWG1 115 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 RELTQ969Z4 430 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 BDH2Q9BUT1 245 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 OR2B2Q9GZK3 357 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 OAZ3Q9UMX2 235 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 BSNQ9UPA5 3926 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 ATMQ13315 3056 aa17.2■□□□□ 0.34
CHMP4A-201ENST00000347519 A0A087WUJ7 227 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 A0A087WZY1 265 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 TMED7-TICAM2A0A0A6YYA0 188 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 TMEM72A0PK05 275 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 SH3PXD2BA1X283 911 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 PDLIM1O00151 329 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 E2F6O75461 281 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 WISP2O76076 250 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 FPR1P21462 350 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 PRKACGP22612 351 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 DNAJA1P31689 397 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 POLR2HP52434 150 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 PPIAP62937 165 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 TOMM20Q15388 145 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 WIPI1Q5MNZ9 446 aaPredicted RBP17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 SLC6A19Q695T7 634 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 OR9Q2Q8NGE9 314 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 OR5K1Q8NHB7 308 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 TMEM234Q8WY98 164 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 TAAR6Q96RI8 345 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF426Q9BUY5 554 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 B3GNT3Q9Y2A9 372 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 TMED7Q9Y3B3 224 aa17.19■□□□□ 0.34
CHMP4A-201ENST00000347519 FAM47E-STBD1D6RA91 191 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 TRAPPC6AO75865 159 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 PEX2P28328 305 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 IFNA8P32881 189 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 SMIM11AP58511 58 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 TRIP10Q15642 601 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 DCST1Q5T197 706 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 SHQ1Q6PI26 577 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 PFN4Q8NHR9 129 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 MRGPRX4Q96LA9 322 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 CIB1Q99828 191 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 ADNPQ9H2P0 1102 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 ANKRD19PQ9H560 264 aa17.18■□□□□ 0.34
CHMP4A-201ENST00000347519 TUBD1Q9UJT1 453 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms