RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PCYT1AP49585 367 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 CLK1P49759 484 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 MAP2K6P52564 334 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 MVDP53602 400 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 SNTB1Q13884 538 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 SYT14P1Q58G82 188 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 BEND4Q6ZU67 534 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 FCRLAQ7L513 359 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 ROBO4Q8WZ75 1007 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 CNOT9Q92600 299 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 DDIT4LQ96D03 193 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 DACH2Q96NX9 599 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 KLHDC3Q9BQ90 382 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 TMEM120AQ9BXJ8 343 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 POLDIP3Q9BY77 421 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 A4GALTQ9NPC4 353 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 KLHL9Q9P2J3 617 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 CLEC4AQ9UMR7 237 aa14.12□□□□□ -0.15
TSPAN4-201ENST00000346501 CREBBPQ92793 2442 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 NBPF19A0A087WUL8 3843 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 CLDN24A6NM45 220 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 FAAHO00519 579 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 C1QCP02747 245 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 RPS4Y1P22090 263 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC6A2P23975 617 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 POLR2HP52434 150 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 MAPRE2Q15555 327 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF311Q5JNZ3 666 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 RNF220Q5VTB9 566 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 RNF128Q8TEB7 428 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF607Q96SK3 696 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 SPATA9Q9BWV2 254 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 OPN3Q9H1Y3 402 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 CTPS2Q9NRF8 586 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 PLSCR4Q9NRQ2 329 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 FGFR1OP2Q9NVK5 253 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 DNAJB12Q9NXW2 375 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF226Q9NYT6 803 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC13A4Q9UKG4 626 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF443Q9Y2A4 671 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 HDGFL3Q9Y3E1 203 aa14.11□□□□□ -0.15
TSPAN4-201ENST00000346501 A0A1W2PNR3 127 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 SH3D21A4FU49 640 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 CDHR4A6H8M9 788 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 PRORSD1PA6NEY8 169 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 A6NNC1 897 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 C16orf97H3BN30 126 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 EFNA2O43921 213 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 BMP2P12643 396 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 ETS2P15036 469 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 CXCR1P25024 350 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 SHC1P29353 583 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC1A3P43003 542 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 CDK6Q00534 326 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 NFYCQ13952 458 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 DAZAP2Q15038 168 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 EXOC3L2Q2M3D2 409 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 MMEL1Q495T6 779 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 PAGE3Q5JUK9 113 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 REEP3Q6NUK4 255 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 TMPPEQ6ZT21 453 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 DHDDSQ86SQ9 333 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 VRK2Q86Y07 508 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF610Q8N9Z0 462 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 BHLHE22Q8NFJ8 381 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 LINC01560Q8TB33 94 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 MED18Q9BUE0 208 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 CCDC106Q9BWC9 280 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 BCL2L10Q9HD36 194 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 VAPAQ9P0L0 249 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 ANGPT4Q9Y264 503 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 DSPPQ9NZW4 1301 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 TEX15Q9BXT5 2789 aa14.1□□□□□ -0.15
TSPAN4-201ENST00000346501 ANKHD1Q8IWZ3 2542 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 HEATR5AQ86XA9 2040 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 TMED7-TICAM2A0A0A6YYA0 188 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 DNPH1O43598 174 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 SERPINB7O75635 380 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 CTAG2O75638 210 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 PGM3O95394 542 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 YES1P07947 543 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 CCNA2P20248 432 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 DIO1P49895 249 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 FAM27E3Q08E93 113 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 RASGEF1BQ0VAM2 473 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 EPS8Q12929 822 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 CYLC2Q14093 348 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 CYP51A1Q16850 503 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 RPS26P11Q5JNZ5 115 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 WBP2NLQ6ICG8 309 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF836Q6ZNA1 936 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 CDH24Q86UP0 819 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 CADM2Q8N3J6 435 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 NFKBIDQ8NI38 313 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 ABHD3Q8WU67 409 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC35B4Q969S0 331 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 SH3GL1Q99961 368 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 GPATCH1Q9BRR8 931 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 SRXN1Q9BYN0 137 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 KLHL4Q9C0H6 718 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms