RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 METTL21AQ8WXB1 218 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 HIST1H2AAQ96QV6 131 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 ASGR1P07306 291 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 GABRR2P28476 465 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 MS4A13Q5J8X5 152 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 OR52E2Q8NGJ4 325 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 USP22Q9UPT9 525 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 DOCK1Q14185 1865 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CPEP16870 476 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 MRPL19P49406 292 aaKnown RBP12.81□□□□□ -0.36
TRIO-202ENST00000344204 TMIGD1Q6UXZ0 262 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 CREB3L4Q8TEY5 395 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 LINC00052Q96N35 136 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 OR2AG1Q9H205 316 aa12.81□□□□□ -0.36
TRIO-202ENST00000344204 RNF212BA8MTL3 300 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 PKIAP61925 76 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 IL20RAQ9UHF4 553 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 COL11A1P12107 1806 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 WTIPA6NIX2 430 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 TOX4O94842 621 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 CXADRP78310 365 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 FABP9Q0Z7S8 132 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 CBLL1Q75N03 491 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 GPR135Q8IZ08 494 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 MIB2Q96AX9 1013 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 MT-ND4LP03901 98 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 TLE4Q04727 773 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 NRMQ8IXM6 262 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 EVA1BQ9NVM1 165 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 HEBP2Q9Y5Z4 205 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ZNF236Q9UL36 1845 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 LINC00862A6NCI5 91 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 RNASET2O00584 256 aaKnown RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 MT-CO2P00403 227 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 EGFP01133 1207 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 C1GALT1C1LP0DN25 315 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 TAF9Q16594 264 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ZNF704Q6ZNC4 412 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 ZNF587Q96SQ5 575 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 A0A0G2JN53 185 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ARGFXA6NJG6 315 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 TMEM200CA6NKL6 621 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 SERPINA2P20848 420 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 TP53I3Q53FA7 332 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 DPY19L4Q7Z388 723 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ADIPOR1Q96A54 375 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 SPACA7Q96KW9 195 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 HS6ST2Q96MM7 605 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ZIC5Q96T25 663 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 GABARAPL3Q9BY60 117 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 PRO1933Q9H354 126 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ASAH2Q9NR71 780 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 SCDO00767 359 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 CLECL1Q8IZS7 167 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 CPPED1Q9BRF8 314 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 CHRDQ9H2X0 955 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 LYRM2Q9NU23 88 aaPredicted RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 NKX3-2P78367 333 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 DSC1Q08554 894 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 HFE2Q6ZVN8 426 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 PRRC1Q96M27 445 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 TESQ9UGI8 421 aaKnown RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 RICTORQ6R327 1708 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 HENMT1Q5T8I9 393 aaKnown RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 OR52I1Q8NGK6 324 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 RSPRY1Q96DX4 576 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 DDX31Q9H8H2 851 aaKnown RBP12.8□□□□□ -0.36
TRIO-202ENST00000344204 BRF2Q9HAW0 419 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 ZNF281Q9Y2X9 895 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 DYSFO75923 2080 aa12.8□□□□□ -0.36
TRIO-202ENST00000344204 LILRB5O75023 590 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 RAB5AP20339 215 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 CLDN6P56747 220 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 TAS2R46P59540 309 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SCAPQ12770 1279 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 PTPRCAPQ14761 206 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SUSD1Q6UWL2 747 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 GPR148Q8TDV2 347 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 INTS14Q96SY0 518 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 COL5A2P05997 1499 aaPredicted RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 TSPAN12O95859 305 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 SUSD6Q92537 303 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 TECTBQ96PL2 329 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 ZNF559Q9BR84 538 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 C1QTNF3-AMACRE9PGA6 284 aa12.79□□□□□ -0.36
TRIO-202ENST00000344204 PQBP1O60828 265 aaKnown RBP12.79□□□□□ -0.36
TRIO-202ENST00000344204 ZNF84P51523 738 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms