RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CPEB2Q7Z5Q1 589 aaKnown RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 CPOQ8IVL8 374 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 NANOGP1Q8N7R0 232 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 NDNFQ8TB73 568 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 RFKQ969G6 155 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 SH3YL1Q96HL8 342 aaPredicted RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 MGLLQ99685 303 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 MND1Q9BWT6 205 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 PPIEQ9UNP9 301 aaKnown RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 SPEGQ15772 3267 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 ALG1L2C9J202 215 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 FOXD2O60548 495 aaPredicted RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 RGS6P49758 472 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 FOXK2Q01167 660 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 TSTQ16762 297 aaKnown RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 NXNL2Q5VZ03 156 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 TMEM205Q6UW68 189 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 C16orf47Q6ZP98 133 aaPredicted RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 CXXC5Q7LFL8 322 aaKnown RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 ATG4DQ86TL0 474 aaPredicted RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 TBC1D15Q8TC07 691 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 PMEPA1Q969W9 287 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 ZNF524Q96C55 264 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 CCNL2Q96S94 520 aaPredicted RBP18.29■□□□□ 0.52
RTN1-202ENST00000342503 PCDHGA5Q9Y5G8 931 aa18.29■□□□□ 0.52
RTN1-202ENST00000342503 IGKV1D-42A0A075B6H8 117 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 FAM183AA6NL82 134 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 ELOA3DA6NLF2 546 aaPredicted RBP18.28■□□□□ 0.52
RTN1-202ENST00000342503 C17orf51A8MQB3 221 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 SOCS6O14544 535 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 NDUFB5O43674 189 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 AIREO43918 545 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 PPM1BO75688 479 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 CDK4P11802 303 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 MST1P26927 711 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 ETV5P41161 510 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 ETV1P50549 477 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 ELOA3BQ3SY89 546 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 C3orf38Q5JPI3 329 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 SHFQ7M4L6 423 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 PROKR2Q8NFJ6 384 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 ELOA3Q8NG57 546 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 OTULINQ96BN8 352 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 C8orf44Q96CB5 159 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 VMP1Q96GC9 406 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 OPALINQ96PE5 141 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 TAPBPLQ9BX59 468 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 TBL1XR1Q9BZK7 514 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 ZBTB20Q9HC78 741 aaPredicted RBP18.28■□□□□ 0.52
RTN1-202ENST00000342503 FBXO8Q9NRD0 319 aa18.28■□□□□ 0.52
RTN1-202ENST00000342503 H2AFY2Q9P0M6 372 aaPredicted RBP18.28■□□□□ 0.52
RTN1-202ENST00000342503 VPS13AQ96RL7 3174 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 LNP1A1A4G5 178 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 LRRN3E7EW58 273 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 MYL12BO14950 172 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 FLRT2O43155 660 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 GMFGO60234 142 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 FADS1O60427 444 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 PPP1R3DO95685 299 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 PNMTP11086 282 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 HTR1FP30939 366 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 TGFBR1P36897 503 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 SLC6A8P48029 635 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 NRG3P56975 720 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 PSPHP78330 225 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 PLA2G2CQ5R387 149 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 PLBD1Q6P4A8 553 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 FAM199XQ6PEV8 388 aaPredicted RBP18.27■□□□□ 0.52
RTN1-202ENST00000342503 RTL4Q6ZR62 310 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 LRRC17Q8N6Y2 441 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 ZNF563Q8TA94 476 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 LPAR4Q99677 370 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 SLC19A3Q9BZV2 496 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 FN3KQ9H479 309 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 GPN3Q9UHW5 284 aaPredicted RBP18.27■□□□□ 0.52
RTN1-202ENST00000342503 NPFFR2Q9Y5X5 522 aa18.27■□□□□ 0.52
RTN1-202ENST00000342503 TRBV11-1A0A0K0K1C0 115 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 FAM86C2PA6NEL3 165 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 OR6C70A6NIJ9 312 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 M0R3G1 203 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 HCRTR2O43614 444 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 EIF4E2O60573 245 aaKnown RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 OR7A10O76100 309 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 SLC6A6P31641 620 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 SPHARQ15513 63 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 FCRLBQ6BAA4 426 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 NUBPLQ8TB37 319 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 THAP3Q8WTV1 239 aaPredicted RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 MED20Q9H944 212 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 CMC2Q9NRP2 79 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 C19orf25Q9UFG5 118 aaPredicted RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 BAIAP2Q9UQB8 552 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 R4GN57 208 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 SCO2O43819 266 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 ZNF354AO60765 605 aaPredicted RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 MYL12AP19105 171 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 EVI2BP34910 448 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 SLC9A3P48764 834 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 CLK1P49759 484 aaKnown RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 SSX1Q16384 188 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms