RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ITGA3P26006 1051 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 SLC1A3P43003 542 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 NUP107P57740 925 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 PRKCDQ05655 676 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 CRYZQ08257 329 aaKnown RBP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 CD47Q08722 323 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 ST3GAL2Q16842 350 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 ZNF791Q3KP31 576 aaPredicted RBP15.82■□□□□ 0.12
CLDN4-201ENST00000340958 TBC1D25Q3MII6 688 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 POMZP3Q6PJE2 187 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 IGF2-ASQ6U949 168 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 CASP12Q6UXS9 341 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 CLEC1AQ8NC01 280 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 FER1L6-AS2Q96M78 137 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 PITX2Q99697 317 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 ATP13A2Q9NQ11 1180 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 TEKT2Q9UIF3 430 aa15.82■□□□□ 0.12
CLDN4-201ENST00000340958 DSPP15924 2871 aaKnown RBP15.81■□□□□ 0.12
CLDN4-201ENST00000340958 A0A087WUJ7 227 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 UNC119BA6NIH7 251 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 EFCAB9A8MZ26 197 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 TLX3O43711 291 aaPredicted RBP15.81■□□□□ 0.12
CLDN4-201ENST00000340958 IGFBP1P08833 259 aaPredicted RBP15.81■□□□□ 0.12
CLDN4-201ENST00000340958 CCNA2P20248 432 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 EEF1B2P24534 225 aaKnown RBP15.81■□□□□ 0.12
CLDN4-201ENST00000340958 TACR3P29371 465 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 ISL1P61371 349 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 CHAF1BQ13112 559 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 QPRTQ15274 297 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 CNIH3Q8TBE1 160 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 TEX12Q9BXU0 123 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 YIPF3Q9GZM5 350 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 DSN1Q9H410 356 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 EGLN3Q9H6Z9 239 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 SLC24A3Q9HC58 644 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 C20orf141Q9NUB4 165 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 TBC1D23Q9NUY8 699 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 MED11Q9P086 117 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 RAXQ9Y2V3 346 aa15.81■□□□□ 0.12
CLDN4-201ENST00000340958 CXCR1P25024 350 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 CASP3P42574 277 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ACER2Q5QJU3 275 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 DCAF10Q5QP82 559 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 PRAMEF20Q5VT98 475 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 B3GNTL1Q67FW5 361 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 RASSF6Q6ZTQ3 369 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 VASH2Q86V25 355 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 C10orf53Q8N6V4 93 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 TMEM234Q8WY98 164 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 OSTF1Q92882 214 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 CCNL2Q96S94 520 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ZNF696Q9H7X3 374 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 HHATLQ9HCP6 504 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ANKRD10Q9NXR5 420 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 TAS2R10Q9NYW0 307 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 WIF1Q9Y5W5 379 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ZAR1LA6NP61 321 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 FAM47E-STBD1D6RA91 191 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 SLC25A12O75746 678 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 AIMP2Q13155 320 aaKnown RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 CDK5R2Q13319 367 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 GINS1Q14691 196 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 TOMM34Q15785 309 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 CLEC12AQ5QGZ9 265 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 JMJD6Q6NYC1 403 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ATG4DQ86TL0 474 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 LSRQ86X29 649 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 BPIFB6Q8NFQ5 453 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 TSPAN14Q8NG11 270 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 GPR119Q8TDV5 335 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ADAMTS17Q8TE56 1095 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 ABI3Q9P2A4 366 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 BLOC1S6Q9UL45 172 aa15.8■□□□□ 0.12
CLDN4-201ENST00000340958 CHCHD2Q9Y6H1 151 aaPredicted RBP15.8■□□□□ 0.12
CLDN4-201ENST00000340958 AHCTF1Q8WYP5 2266 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 ANKUB1A6NFN9 424 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 ENO4A6NNW6 628 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 ATP6V1B1P15313 513 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 BMP7P18075 431 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 MAKP20794 623 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 MSX1P28360 303 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 ZNF41P51814 821 aaPredicted RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 SMSP52788 366 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 SUMO3P55854 103 aaPredicted RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 CTBP2P56545 445 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 OC90Q02509 493 aaPredicted RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 SNTA1Q13424 505 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 TOP3AQ13472 1001 aaPredicted RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 CTU2Q2VPK5 515 aaKnown RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 C6orf141Q5SZD1 244 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 SLC22A10Q63ZE4 541 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 PTCHD4Q6ZW05 846 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 IQCF1Q8N6M8 205 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 OR52L1Q8NGH7 329 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 FANK1Q8TC84 345 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 HDAC2Q92769 488 aaKnown RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 FGF11Q92914 225 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 SGTBQ96EQ0 304 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 YTHDF1Q9BYJ9 559 aaKnown RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 MEPEQ9NQ76 525 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms