RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CLK1P49759 484 aaKnown RBP11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 RNF144AP50876 292 aaPredicted RBP11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 MAP2K6P52564 334 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 CRISP3P54108 245 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 SESN3P58005 492 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 RAC3P60763 192 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 CHRNEQ04844 493 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 FAM27E3Q08E93 113 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 SYPL1Q16563 259 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 C6orf10Q5SRN2 563 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 BEND4Q6ZU67 534 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 GRINAQ7Z429 371 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 CDC20BQ86Y33 519 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 PEX5LQ8IYB4 626 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZNF440Q8IYI8 595 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZNF563Q8TA94 476 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 MAGEB18Q96M61 343 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 OR10A4Q9H209 315 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLC38A1Q9H2H9 487 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 CCDC134Q9H6E4 229 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 TPT1P8Q9HAU6 139 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLCO1B3Q9NPD5 702 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
SIRPB3P-201ENST00000340424 DNPH1O43598 174 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 EFNA2O43921 213 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 PRKD3O94806 890 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 OPN1LWP04000 364 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 CHRM4P08173 479 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 CD1EP15812 388 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 IL7RP16871 459 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 SHC1P29353 583 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 IDH3AP50213 366 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 ATP4BP51164 291 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 MVDP53602 400 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 AQP5P55064 265 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 DSTNP60981 165 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 CSNK2A1P68400 391 aaPredicted RBP11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 MERTKQ12866 999 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 FADDQ13158 208 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 TESK1Q15569 626 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 COX20Q5RI15 118 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 TMEM201Q5SNT2 666 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 DNAJC14Q6Y2X3 702 aaPredicted RBP11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 PLEKHM3Q6ZWE6 761 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 FCRLAQ7L513 359 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 ANKFN1Q8N957 763 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZNF610Q8N9Z0 462 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 OR9I1Q8NGQ6 314 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 PNPT1Q8TCS8 783 aaKnown RBP11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 CKAP2Q8WWK9 683 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 GTF2H4Q92759 462 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 CCT8L2Q96SF2 557 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 SIKE1Q9BRV8 207 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 MED18Q9BUE0 208 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 RABEP2Q9H5N1 569 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 COQ10BQ9H8M1 238 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 CACYBPQ9HB71 228 aaKnown RBP11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 KLHL9Q9P2J3 617 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 KLHL13Q9P2N7 655 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 HRNRQ86YZ3 2850 aaPredicted RBP11.91□□□□□ -0.5
SIRPB3P-201ENST00000340424 SPG11Q96JI7 2443 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 DSPPQ9NZW4 1301 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 A0A096LPI6 279 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 GMNCA6NCL1 334 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 HRGP04196 525 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 YES1P07947 543 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 PPIBP23284 216 aaKnown RBP11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 DNASE1P24855 282 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 CRATP43155 626 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 GUCY1A3Q02108 690 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 LIN52Q52LA3 116 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 SYT14P1Q58G82 188 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 PRAMEF8Q5VWM4 474 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 PRAMEF7Q5VXH5 474 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 OLIG3Q7RTU3 272 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 HEATR5AQ86XA9 2040 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 ATP6V1C2Q8NEY4 427 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZG16BQ96DA0 208 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 ZHX1-C8orf76Q96EF9 292 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 CCDC106Q9BWC9 280 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 SRXN1Q9BYN0 137 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 QRSL1Q9H0R6 528 aaKnown RBP11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 ARMC7Q9H6L4 198 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 CHRNA9Q9UGM1 479 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 ITGB1BP2Q9UKP3 347 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 HDGFL3Q9Y3E1 203 aa11.9□□□□□ -0.5
SIRPB3P-201ENST00000340424 A0A0G2JPF8 293 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 HNRNPCL2B2RXH8 293 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 HNRNPCL3B7ZW38 293 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF208O43345 1280 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 HNRNPCL1O60812 293 aaKnown RBP11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 THBS1P07996 1170 aa11.89□□□□□ -0.51
SIRPB3P-201ENST00000340424 TFPTP0C1Z6 253 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms