RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FNDC8Q8TC99 324 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 ZG16BQ96DA0 208 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 OR2B2Q9GZK3 357 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 PTGES2Q9H7Z7 377 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 TIMMDC1Q9NPL8 285 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 TAS2R10Q9NYW0 307 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 TRAPPC4Q9Y296 219 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 COL6A3P12111 3177 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 A0A1W2PNV4 684 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 A6NHS1 94 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 CPSF4LA6NMK7 179 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 HSPB2A8KAH6 182 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 EFCAB9A8MZ26 197 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 SEC24DO94855 1032 aaPredicted RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 ITIH1P19827 911 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 CRHBPP24387 322 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 DSCR4P56555 118 aaPredicted RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 SELENBP1Q13228 472 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 HSPB2Q16082 182 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 ZBED5Q49AG3 693 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 PRSS48Q7RTY5 328 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 RBM45Q8IUH3 476 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 OR2M3Q8NG83 312 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 TMEM163Q8TC26 289 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 GAL3ST4Q96RP7 486 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 MFRPQ9BY79 579 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 FGF20Q9NP95 211 aaPredicted RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 SERINC1Q9NRX5 453 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 P4HTMQ9NXG6 502 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 CDV3Q9UKY7 258 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 HDGFL3Q9Y3E1 203 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 RPL36Q9Y3U8 105 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 ELOA3DA6NLF2 546 aaPredicted RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 A8MUA0 341 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 IFNGP01579 166 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 SMIM18P0DKX4 95 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 BLVRAP53004 296 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 SLC25A1P53007 311 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.54□□□□□ -1.36
NUP43-201ENST00000340413 PTGES3Q15185 160 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 LRRC36Q1X8D7 754 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 PGGHGQ32M88 737 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 ELOA3BQ3SY89 546 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 KLHL22Q53GT1 634 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 CASP12Q6UXS9 341 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 GTPBP8Q8N3Z3 284 aaPredicted RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 ELOA3Q8NG57 546 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 OR2T33Q8NG76 320 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 PHOSPHO1Q8TCT1 267 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 GRHL3Q8TE85 626 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 DDIT4LQ96D03 193 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 BPIFA2Q96DR5 249 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 ADOQ96SZ5 270 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 NIPSNAP1Q9BPW8 284 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 ING2Q9H160 280 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 RIBC2Q9H4K1 309 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 MRPL39Q9NYK5 338 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 WARS2Q9UGM6 360 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 CENPVL1A0A0U1RR11 272 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 NDUFB2O95178 105 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 RPSAP08865 295 aaKnown RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 CNR1P21554 472 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 SRD5A2P31213 254 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 CASP3P42574 277 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 GIPRP48546 466 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 PCYT1AP49585 367 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 TPD52P55327 224 aaPredicted RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 C3orf38Q5JPI3 329 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 SLC22A10Q63ZE4 541 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 ZNF420Q8TAQ5 688 aaPredicted RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 EFHD2Q96C19 240 aaPredicted RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 CNBD2Q96M20 576 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 MUS81Q96NY9 551 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 CDCA4Q9BXL8 241 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 PPP4R1LQ9P1A2 415 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 SIGLEC7Q9Y286 467 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 RP1P56715 2156 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 LOC101059948A0A1B0GTJ6 334 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 SLC1A7O00341 560 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 PRKNO60260 465 aaPredicted RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 ITGA10O75578 1167 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 CBR3O75828 277 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 BGLAPP02818 100 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 ASAH2BP0C7U1 165 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 GAAP10253 952 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 NR2C1P13056 603 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 TNFRSF1BP20333 461 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 UQCRC1P31930 480 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 IST1P53990 364 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 CD47Q08722 323 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 MRPL28Q13084 256 aaKnown RBP6.53□□□□□ -1.36
NUP43-201ENST00000340413 MFAP5Q13361 173 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 GGTLC2Q14390 218 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 CD226Q15762 336 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 BCL2A1Q16548 175 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 ZNF74Q16587 644 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 C1QTNF12Q5T7M4 302 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 NXNL2Q5VZ03 156 aa6.53□□□□□ -1.36
NUP43-201ENST00000340413 PRICKLE2Q7Z3G6 844 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms