RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 MAN2B1O00754 1011 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 CBX5P45973 191 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 UBE2MP61081 183 aaKnown RBP18.67■□□□□ 0.58
UBC-201ENST00000339647 TCTN1Q2MV58 587 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 C9orf64Q5T6V5 341 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 GAREM2Q75VX8 874 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 LRRC46Q96FV0 321 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 GINS4Q9BRT9 223 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 KLHL28Q9NXS3 571 aa18.67■□□□□ 0.58
UBC-201ENST00000339647 A0A0C4DFX4 3053 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 TET1Q8NFU7 2136 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 KRT33AO76009 404 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 SPDEFO95238 335 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 RPL35P42766 123 aaKnown RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 PDX1P52945 283 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 CLDN12P56749 244 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 H2BFSP57053 126 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 STPG1Q5TH74 334 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 NPAS4Q8IUM7 802 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 OR52L1Q8NGH7 329 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 BRIX1Q8TDN6 353 aaKnown RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 FN3KQ9H479 309 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 SIDT1Q9NXL6 827 aaKnown RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 KLHL9Q9P2J3 617 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 NFKBIL1Q9UBC1 381 aaPredicted RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 A0A0A6YYD5 115 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 WASH3PC4AMC7 463 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 GABARAPH6UMI1 98 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 PCDH8O95206 1070 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 ECDO95905 644 aaPredicted RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 ANXA11P50995 505 aaKnown RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 EPHB3P54753 998 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 FOXK2Q01167 660 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 WDR88Q6ZMY6 472 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 ARL14Q8N4G2 192 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 HDDC3Q8N4P3 179 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 OR5M9Q8NGP3 310 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 SLC25A38Q96DW6 304 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 USB1Q9BQ65 265 aaKnown RBP18.66■□□□□ 0.58
UBC-201ENST00000339647 SLC6A17Q9H1V8 727 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 KLHL31Q9H511 634 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 INPP5EQ9NRR6 644 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 RNF186Q9NXI6 227 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 ANKRD10Q9NXR5 420 aa18.66■□□□□ 0.58
UBC-201ENST00000339647 SLC22A31A6NKX4 558 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 NEDD8-MDP1E9PL57 170 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 PTP4A3O75365 173 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 OR5F1O95221 314 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 NAT2P11245 290 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 MC3RP41968 323 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 GDI2P50395 445 aaKnown RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 C18orf63Q68DL7 685 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 OR7E24Q6IFN5 339 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 DPPA4Q7L190 304 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 FCRLAQ7L513 359 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 NAXDQ8IW45 347 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 CDH26Q8IXH8 852 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 RAD51AP1Q96B01 352 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 MRPL17Q9NRX2 175 aaKnown RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 OPN4Q9UHM6 478 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 IRAK3Q9Y616 596 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 NAP1L6A6NFF2 107 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 FMO6PO60774 539 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 HPP00738 406 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 RLN2P04090 185 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 UCHL1P09936 223 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 VSIG10L2P0DP72 767 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 TYRP1P17643 537 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 BMP7P18075 431 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 AKR1D1P51857 326 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 FLI1Q01543 452 aaPredicted RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 CAMK1Q14012 370 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 CSRP2Q16527 193 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 FAM46CQ5VWP2 391 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 EIF4E3Q8N5X7 224 aaKnown RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 FCAMRQ8WWV6 532 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 PNPLA2Q96AD5 504 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 ZNF764Q96H86 408 aaPredicted RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 HS6ST2Q96MM7 605 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 CD180Q99467 661 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 GFI1Q99684 422 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 GPN1Q9HCN4 374 aaPredicted RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 FBXL3Q9UKT7 428 aa18.65■□□□□ 0.58
UBC-201ENST00000339647 KLF2Q9Y5W3 355 aaPredicted RBP18.65■□□□□ 0.58
UBC-201ENST00000339647 HEATR5BQ9P2D3 2071 aa18.64■□□□□ 0.58
UBC-201ENST00000339647 CLTBP09497 229 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 ZNF35P13682 527 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 RPS11P62280 158 aaKnown RBP eCLIP18.64■□□□□ 0.57
UBC-201ENST00000339647 MAT1AQ00266 395 aaKnown RBP18.64■□□□□ 0.57
UBC-201ENST00000339647 TMEM215Q68D42 235 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 ZC3H14Q6PJT7 736 aaKnown RBP18.64■□□□□ 0.57
UBC-201ENST00000339647 TMEM64Q6YI46 380 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 LNX2Q8N448 690 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 ARSGQ96EG1 525 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 PDCD1LG2Q9BQ51 273 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 SEMA4CQ9C0C4 833 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 SLC25A18Q9H1K4 315 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 MED11Q9P086 117 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 PYCARD-AS1I3L0S3 204 aa18.64■□□□□ 0.57
UBC-201ENST00000339647 LEFTY2O00292 366 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms