RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 GPR68Q15743 365 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 ZNF141Q15928 474 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 NDUFAF6Q330K2 333 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.55□□□□□ -0.4
COMMD4-202ENST00000338995 PDZK1Q5T2W1 519 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 C1QTNF12Q5T7M4 302 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 IL23RQ5VWK5 629 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 ATG4DQ86TL0 474 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-202ENST00000338995 MUC15Q8N387 334 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 FNDC5Q8NAU1 212 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 OIT3Q8WWZ8 545 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 ZNF300Q96RE9 604 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-202ENST00000338995 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 DUSP26Q9BV47 211 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 CACNG6Q9BXT2 260 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 C12orf65Q9H3J6 166 aaKnown RBP12.55□□□□□ -0.4
COMMD4-202ENST00000338995 FKRPQ9H9S5 495 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 ASB6Q9NWX5 421 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 KCNE3Q9Y6H6 103 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 PMF1-BGLAPU3KQ54 211 aa12.55□□□□□ -0.4
COMMD4-202ENST00000338995 FBN1P35555 2871 aaKnown RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 GOLGA8QA0A0J9YX86 632 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 GOLGA8OA6NCC3 632 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 GOLGA8NF8WBI6 632 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 DNPH1O43598 174 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 CSF3P09919 207 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 SOAT1P35610 550 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 ZNF83P51522 516 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 LOXL1Q08397 574 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 UGT3A2Q3SY77 523 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 SYT14P1Q58G82 188 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 ATAD3BQ5T9A4 648 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 CYB5R2Q6BCY4 276 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 ZNF544Q6NX49 715 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 C16orf62Q7Z3J2 963 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 C6orf120Q7Z4R8 191 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 EIF1ADQ8N9N8 165 aaKnown RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 OR52N5Q8NH56 324 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 PIGXQ8TBF5 258 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 FAM168AQ92567 244 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 ZNF75CPQ92670 426 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 PROX1Q92786 737 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 AMBRA1Q9C0C7 1298 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 QRSL1Q9H0R6 528 aaKnown RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-202ENST00000338995 SLC35A3Q9Y2D2 325 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 HDGFL3Q9Y3E1 203 aa12.54□□□□□ -0.4
COMMD4-202ENST00000338995 IGHV4-30-2A0A087WSY4 118 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 ELOA3DA6NLF2 546 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-202ENST00000338995 E7EQL1 145 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 DNAJA2O60884 412 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 RAD51DO75771 328 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 UBTFL6P0CB48 400 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-202ENST00000338995 PTNP21246 168 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 CD40P25942 277 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 SERPINB5P36952 375 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 MAGEA8P43361 318 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 IRX1P78414 480 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-202ENST00000338995 TGFBR3Q03167 851 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 PTGR1Q14914 329 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 PCLAFQ15004 111 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 TMEM249Q2WGJ8 235 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 PGS1Q32NB8 556 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 ARHGAP11BQ3KRB8 267 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 ELOA3BQ3SY89 546 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 C6orf136Q5SQH8 315 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 C6orf52Q5T4I8 152 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 PHC2Q8IXK0 858 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 ELOA3Q8NG57 546 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 PMM1Q92871 262 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 TUBGCP3Q96CW5 907 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 SHARPINQ9H0F6 387 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 TAS2R16Q9NYV7 291 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 UPB1Q9UBR1 384 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
COMMD4-202ENST00000338995 TLDC2A0PJX2 215 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 ESPNB1AK53 854 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 M0R1B8 84 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 GPRIN2O60269 458 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 H6PDO95479 791 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 PMS2P2O95744 297 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 IGHV3-9P01782 118 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 SHBGP04278 402 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 CHRNGP07510 517 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 ALDH3A1P30838 453 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 HTR3AP46098 478 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 HBA1P69905 142 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 VLDLRP98155 873 aa12.52□□□□□ -0.41
COMMD4-202ENST00000338995 SKP2Q13309 424 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms