RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 IL7RP16871 459 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 PEX19P40855 299 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 CRISP3P54108 245 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 FAM27E3Q08E93 113 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 PDSS1Q5T2R2 415 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 C3orf33Q6P1S2 294 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 KIF18BQ86Y91 864 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 PEX5LQ8IYB4 626 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 RNF128Q8TEB7 428 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 TMEM234Q8WY98 164 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 GMPPAQ96IJ6 420 aaPredicted RBP13.63□□□□□ -0.23
PRKN-201ENST00000338468 CPPED1Q9BRF8 314 aaPredicted RBP13.63□□□□□ -0.23
PRKN-201ENST00000338468 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 BCL2L10Q9HD36 194 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 CTPS2Q9NRF8 586 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 CALML5Q9NZT1 146 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 TRIM33Q9UPN9 1127 aa13.63□□□□□ -0.23
PRKN-201ENST00000338468 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
PRKN-201ENST00000338468 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 TUBAL3A6NHL2 446 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 HNRNPCL2B2RXH8 293 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 FAAHO00519 579 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 HNRNPCL1O60812 293 aaKnown RBP13.62□□□□□ -0.23
PRKN-201ENST00000338468 CTAG2O75638 210 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 ENPP1P22413 925 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 APOBEC1P41238 236 aaKnown RBP13.62□□□□□ -0.23
PRKN-201ENST00000338468 CPA2P48052 419 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 IDH2P48735 452 aaKnown RBP13.62□□□□□ -0.23
PRKN-201ENST00000338468 SF3A3Q12874 501 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRKN-201ENST00000338468 EPS8Q12929 822 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 METTL21CQ5VZV1 264 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 GRINAQ7Z429 371 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 ADGRG3Q86Y34 549 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 CLIP4Q8N3C7 705 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 DPP10Q8N608 796 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 ZNF610Q8N9Z0 462 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 ZNF563Q8TA94 476 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 ABHD3Q8WU67 409 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 CPNE4Q96A23 557 aaPredicted RBP13.62□□□□□ -0.23
PRKN-201ENST00000338468 RAD21L1Q9H4I0 556 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 MED4Q9NPJ6 270 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 PLSCR4Q9NRQ2 329 aa13.62□□□□□ -0.23
PRKN-201ENST00000338468 ING1Q9UK53 422 aaPredicted RBP13.62□□□□□ -0.23
PRKN-201ENST00000338468 MPDZO75970 2070 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 IGHV3-15A0A0B4J1V0 119 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 PGM3O95394 542 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 THBS1P07996 1170 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 ARAFP10398 606 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 CD99P14209 185 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 GPX2P18283 190 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 AGTR1P30556 359 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 CCKARP32238 428 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 CPOXP36551 454 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 ACAA2P42765 397 aaKnown RBP13.61□□□□□ -0.23
PRKN-201ENST00000338468 PCYT1AP49585 367 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 RAC3P60763 192 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 GNA13Q14344 377 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
PRKN-201ENST00000338468 ADRM1Q16186 407 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 LIN52Q52LA3 116 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 SYT14P1Q58G82 188 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 RUNDC3AQ59EK9 446 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 RNF220Q5VTB9 566 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 PRAMEF8Q5VWM4 474 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 PRAMEF7Q5VXH5 474 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 OR6K3Q8NGY3 331 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 OR5B2Q96R09 309 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 TIGARQ9NQ88 270 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 GLRX2Q9NS18 164 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 CHRNA9Q9UGM1 479 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 LEF1Q9UJU2 399 aaPredicted RBP13.61□□□□□ -0.23
PRKN-201ENST00000338468 OSGIN1Q9UJX0 560 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 PROCRQ9UNN8 238 aa13.61□□□□□ -0.23
PRKN-201ENST00000338468 CFAP73A6NFT4 308 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 A6NNC1 897 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 FBP2O00757 339 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 SMAD9O15198 467 aaKnown RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 ATP8B1O43520 1251 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 VIMP08670 466 aaKnown RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 PABPC4LP0CB38 370 aaKnown RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 TROVE2P10155 538 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■■■■ 29.4
PRKN-201ENST00000338468 EPXP11678 715 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 PRG2P13727 222 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 PPIBP23284 216 aaKnown RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 SLC7A1P30825 629 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 CD79BP40259 229 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 DIO1P49895 249 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 ARFIP2P53365 341 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 SELPLGQ14242 412 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 GCNT6Q5T4J0 391 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 TMPPEQ6ZT21 453 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 FCRLAQ7L513 359 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms